DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cont and IGDCC4

DIOPT Version :10

Sequence 1:NP_649461.2 Gene:Cont / 40553 FlyBaseID:FBgn0037240 Length:1390 Species:Drosophila melanogaster
Sequence 2:XP_047288863.1 Gene:IGDCC4 / 57722 HGNCID:13770 Length:1319 Species:Homo sapiens


Alignment Length:1134 Identity:238/1134 - (20%)
Similarity:430/1134 - (37%) Gaps:257/1134 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 RPYHYGLD---INDMERIPRGPY----FVK----QPNDTTFDVN------------KNRLINDVT 385
            ||:..|.|   ::::.|....|.    :|:    .|.:||.:::            :...:.:.:
Human     7 RPHPPGTDQGSVDEVSRASSSPQPSAEWVRGELLLPQETTVELSCGVGPLQVILGPEQAAVLNCS 71

  Fly   386 LSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQDRYTISGGNLIIYEP----------KQALD 440
            |...|.|.|| ..||.::  .|..||:..:       :.:..|:|.:.:|          .:|:.
Human    72 LGAAAAGPPT-RVTWSKD--GDTLLEHDHL-------HLLPNGSLWLSQPLAPNGSDESVPEAVG 126

  Fly   441 --QGAYHCVAENKFGRIRSESAHLNFGFIMEFNLKRSAETSEMNWGKSIFCDPPQHYPDVRYYWA 503
              :|.|.|:|....|.:.|::|.:....:.:|:|...::|.|.| |.:.|....:..|.....|.
Human   127 VIEGNYSCLAHGPLGVLASQTAVVKLATLADFSLHPESQTVEEN-GTARFECHIEGLPAPIITWE 190

  Fly   504 RDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCTVQTLVSDTGRNGPFFPLRVTPNSNYQA 568
            :|...  :.|:.|:.|..:|.|....::..|...|.|    :.:::.|.          :.:.:|
Human   191 KDQVT--LPEEPRLIVLPNGVLQILDVQESDAGPYRC----VATNSARQ----------HFSQEA 239

  Fly   569 LI-------FANTFPK--VFPEAP-----VAGDEIRLECMAFGYPIPSYNWTRQGLPLQRNAYTI 619
            |:       .|:|..:  |...||     |:|..:.:||:|...|.|..:|.||....:......
Human   240 LLSVAHRGSLASTRGQDVVIVAAPENTTVVSGQSVVMECVASADPTPFVSWVRQDGDSRAQRVPA 304

  Fly   620 NYGRVLIIQNATTNDNGEYSCTITNPRKTLMKSIYINIQMRPQF------TIPLKDMIKDYNSDV 678
            ..|..:     .|.|    .|.           .:|.:|..|:.      .:|            
Human   305 RGGNEI-----RTRD----GCV-----------CFIRVQSVPEVRRLKGRAVP------------ 337

  Fly   679 TFICEAFAIPDANYTWYKNAERLDPANINRDRYII-QDNVLTIKFLEKDKDDAMYQCGAQNQLKT 742
                   ::|.:    ...:...|...|:.|..:: :.|:|...  .:.....:|.|.|......
Human   338 -------SVPSS----ASPSPSPDGKPISTDVIVLGRTNLLIAN--AQPWHSGVYVCRANKPRTR 389

  Fly   743 SF--SSAQLRVLSMKPSFKKHPLESEVYAVYNGNTT-IVCDPEAAPRPKFQWKKDGQVIGSGGHR 804
            .|  ::|:||||: .|:..:.|   |..:....:|. .||.....|||..:|..:|..:...|..
Human   390 DFATAAAELRVLA-APAITQAP---EALSRTRASTARFVCRASGEPRPALRWLHNGAPLRPNGRV 450

  Fly   805 RIL-PSGTLTISPTSRDDEGIYTCIASNQAGTDESHARV-IVLQEIRFIETPPQRIVSKEHDLIF 867
            ::. ..|:|.|:.....|.|.|.|:|.|.||...:.|.: :|::|  .:.:.|.|:.:..     
Human   451 KVQGGGGSLVITQIGLQDAGYYQCVAENSAGMACAAASLAVVVRE--GLPSAPTRVTATP----- 508

  Fly   868 LHCEAAFDELLDIAYVWK----HNGEVL---KNNHDGTGRIIVDWNRLTVHNTS----MRDA--- 918
            |...|       :...|:    |:.:::   .:.....|...|:: :..|:|.:    :||.   
Human   509 LSSSA-------VLVAWERPEMHSEQIIGFSLHYQKARGMDNVEY-QFAVNNDTTELQVRDLEPN 565

  Fly   919 GDYECVVKSAVNEISSKTSV-----SIEGAPGAPGGVQVIQISKTKAIIEWV---DGSHNGRAIR 975
            .|||..|.:.....:|:||.     :::..|.|...:.:...:.:...:.|:   ....||:.::
Human   566 TDYEFYVVAYSQLGASRTSTPALVHTLDDVPSAAPQLSLSSPNPSDIRVAWLPLPPSLSNGQVVK 630

  Fly   976 YYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVNLTPWSAYEFSVTAVNDLGIGTPSA-- 1038
            |....|....::.:   ||.|:..|.       |..:.:|.|...|...::|....|.|.||.  
Human   631 YKIEYGLGKEDQIF---STEVRGNET-------QLMLNSLQPNKVYRVRISAGTAAGFGAPSQWM 685

  Fly  1039 --PSPIYSTYEDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASD 1101
              .:|........|: ||..: ....|:..|.::|.| .|......|  ||::|:..||.|.|:.
Human   686 HHRTPSMHNQSHVPF-APAEL-KVQAKMESLVVSWQP-PPHPTQISG--YKLYWREVGAEEEANG 745

  Fly  1102 E-----------------IKKQDHMGVAVVNIPLNNYYTEYEVKVQAIN-------SVGKGPESE 1142
            :                 :||:.........:|    ...||||:.|.|       :|.|| ::|
Human   746 DRLPGGRGDQAWDVGPVRLKKKVKQYELTQLVP----GRLYEVKLVAFNKHEDGYAAVWKG-KTE 805

  Fly  1143 IAVIHSAEDMP-QVAPQKPIALAY----NSTCFNVTWQPIDMSRENIRGKLIGHRLKYWKTTHQE 1202
            .|   .|.||| |..|..|.|..:    :||...:.|:..|.:..    |::.:.:::.....:.
Human   806 KA---PAPDMPIQRGPPLPPAHVHAESNSSTSIWLRWKKPDFTTV----KIVNYTVRFSPWGLRN 863

  Fly  1203 EDSVYYLSRTTRNWALIVGLQPDTYYFVKVMAYNAAGEGPESERFEERTYRKAPQKPPSSVHVYG 1267
            ...|.|.:.:..: .||.||:|.|.|...|.::....:||.....|..|....|..|||.:.:..
Human   864 ASLVTYYTSSGED-ILIGGLKPFTKYEFAVQSHGVDMDGPFGSVVERSTLPDRPSTPPSDLRLSP 927

  Fly  1268 INPSTVRVVWRYVSPSQDEEPVEGYKVRIWESDQNMITANNTIVPIGQKLESYINNLTPGKSYNM 1332
            :.|||||:.|  ..|::....:..|.:        :.::|:|     |....:....|.|..::.
Human   928 LTPSTVRLHW--CPPTEPNGEIVEYLI--------LYSSNHT-----QPEHQWTLLTTQGNIFSA 977

  Fly  1333 RVLAYSNGGDGRMSSPTLHFQMGKTTRNG 1361
            .|       .|..|.....|:||..|..|
Human   978 EV-------HGLESDTRYFFKMGARTEVG 999

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ContNP_649461.2 CLECT 139..>223 CDD:214480
Ig 361..466 CDD:472250 26/136 (19%)
Ig strand B 384..388 CDD:409356 1/3 (33%)
Ig strand C 397..409 CDD:409356 3/11 (27%)
Ig strand E 428..432 CDD:409356 2/3 (67%)
Ig strand F 443..448 CDD:409356 2/4 (50%)
Ig strand G 457..460 CDD:409356 1/2 (50%)
Ig 474..559 CDD:472250 17/84 (20%)
Ig strand B 485..489 CDD:409392 0/3 (0%)
Ig strand C 499..503 CDD:409392 0/3 (0%)
Ig strand E 523..527 CDD:409392 2/3 (67%)
Ig strand F 537..542 CDD:409392 2/4 (50%)
Ig strand G 553..556 CDD:409392 0/2 (0%)
Ig_3 584..644 CDD:464046 14/59 (24%)
Ig_3 660..738 CDD:464046 11/84 (13%)
Ig 756..844 CDD:472250 24/90 (27%)
Ig strand B 775..779 CDD:409358 1/4 (25%)
Ig strand C 788..792 CDD:409358 0/3 (0%)
Ig strand E 810..814 CDD:409358 2/3 (67%)
Ig strand F 824..829 CDD:409358 2/4 (50%)
Ig strand G 837..840 CDD:409358 0/2 (0%)
Ig <868..944 CDD:472250 17/94 (18%)
Ig strand C 881..885 CDD:409359 0/3 (0%)
Ig strand E 906..910 CDD:409359 0/3 (0%)
Ig strand F 920..925 CDD:409359 3/4 (75%)
Ig strand G 933..936 CDD:409359 1/2 (50%)
FN3 944..1043 CDD:238020 21/105 (20%)
FN3 1053..1146 CDD:238020 29/116 (25%)
fn3 1156..1244 CDD:394996 20/91 (22%)
fn3 1259..1346 CDD:394996 18/86 (21%)
IGDCC4XP_047288863.1 Ig 66..148 CDD:409353 20/91 (22%)
Ig strand B 66..70 CDD:409353 0/3 (0%)
Ig strand C 82..86 CDD:409353 1/3 (33%)
Ig strand E 104..108 CDD:409353 2/3 (67%)
Ig strand F 131..136 CDD:409353 2/4 (50%)
Ig strand G 145..148 CDD:409353 1/2 (50%)
I-set 158..231 CDD:400151 18/79 (23%)
Ig strand B 173..177 CDD:409353 1/3 (33%)
Ig strand C 186..190 CDD:409353 0/3 (0%)
Ig strand E 208..212 CDD:409353 2/3 (67%)
Ig strand F 222..227 CDD:409353 2/8 (25%)
IG_like 263..400 CDD:214653 31/181 (17%)
Ig strand B 274..278 CDD:409353 0/3 (0%)
Ig strand C 287..291 CDD:409353 0/3 (0%)
Ig 419..491 CDD:472250 21/71 (30%)
Ig strand B 421..425 CDD:143205 0/3 (0%)
Ig strand C 434..438 CDD:143205 0/3 (0%)
Ig strand E 457..461 CDD:143205 2/3 (67%)
FN3 <471..>677 CDD:442628 44/230 (19%)
Ig strand F 471..476 CDD:143205 2/4 (50%)
Ig strand G 484..487 CDD:143205 0/2 (0%)
fn3 701..795 CDD:394996 24/101 (24%)
FN3 819..911 CDD:238020 20/96 (21%)
FN3 919..1011 CDD:238020 24/103 (23%)
PHA03247 <1053..1319 CDD:223021
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.