DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cont and Cntn6

DIOPT Version :9

Sequence 1:NP_649461.2 Gene:Cont / 40553 FlyBaseID:FBgn0037240 Length:1390 Species:Drosophila melanogaster
Sequence 2:NP_059079.2 Gene:Cntn6 / 53870 MGIID:1858223 Length:1028 Species:Mus musculus


Alignment Length:1022 Identity:309/1022 - (30%)
Similarity:499/1022 - (48%) Gaps:98/1022 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   362 PYFVKQPNDTTFDVNKNRLINDVTLSCLANGYPTPSYTWYRE-VYVDDRLEYQKIDPLAQDRYTI 425
            |.|:::|.|..|.::.:|  :::.|:|.|||||:|.|.|.:. ..:|..:.|         .|.:
Mouse    26 PIFIQEPQDVIFPLDLSR--SEIILTCTANGYPSPHYRWKQNGTDIDFGMTY---------HYRL 79

  Fly   426 SGGNLIIYEPKQALDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNLK-RSAETSEMNWGKSIFC 489
            .||:|.|..|:...|.|.|.|:|.|..|.|.|..|.|.|.:|.:|..| ||..:.....|..:.|
Mouse    80 DGGSLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLC 144

  Fly   490 DPPQHYPDVRYYWARDYFPNFVEEDQRVFVSRD-GALYFSFIETVDRANYSCTVQTLVSDTGRNG 553
            .||.|:.::.|.|..:..|.:|:||:|.|||:| |.|||:.:|..|..||:|.|....:.....|
Mouse   145 GPPPHFGELSYAWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRSVQG 209

  Fly   554 PFFPLRVTPNSNYQALIFANTFPKV---FPEAPVAGDE--IRLECMAFGYPIPSYNWTR-QGLPL 612
            |..||.:..:.     :.....||:   |||...|..:  |:|||.|.|.|:|..:|.| .|.|:
Mouse   210 PPTPLVLRTDG-----VMGEYEPKIEVRFPETIQAAKDSSIKLECFALGNPVPDISWKRLDGSPM 269

  Fly   613 QRNAYTINYGR---VLIIQNATTNDNGEYSCTITNPR-KTLMKSIYINIQMRPQFTIPLKDMIKD 673
            ...   |.|.:   :|.|......|.|.|.|...|.| :.|.|...| ....|::...:::....
Mouse   270 PGK---IKYSKSQAILEIPKFQQEDEGFYECIAGNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLS 330

  Fly   674 YNSDVTFICEAFAIPDANYTWYKNAERLDPANINRDRYIIQDNVLTIKFLEKDKDDAMYQCGAQN 738
            ....:.:.|:|...|:.:|||.||.:||:    ..:|..|::..|.|..| ...|..:|||.|:|
Mouse   331 IYDSLFWECKASGNPNPSYTWLKNGQRLN----TEERIQIENGTLIITML-NISDSGIYQCAAEN 390

  Fly   739 QLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGSGGH 803
            :.:|.:::|:||||:..|.|.|:|::........|:.:|.|.|.|.|:....||:..:.:.....
Mouse   391 KYQTIYANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKR 455

  Fly   804 RRILPSGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHDLIFL 868
            ...|..|:|.|...:|.|.|.|||:|:||.|..:|...::| :|...|..||.::.....:.|.|
Mouse   456 VLFLEDGSLKICNVTRADAGSYTCVATNQFGNGKSSGGLVV-KERTIITVPPSKMDVTVGESIVL 519

  Fly   869 HCEAAFDELLDIAYVWKHNGEV--LKNNHDGTGRIIVDWNR--------LTVHNTSMRDAGDYEC 923
            .|:.:.|..:::.:||..||::  ||..       :..:.|        |.:.|..:..:|.|.|
Mouse   520 PCQVSHDPTMEVLFVWYFNGDIIDLKKG-------VAHFERIGGESVGDLMIRNIQLGHSGKYLC 577

  Fly   924 VVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVDGSHNGRAIRYYNILGRTNWNRT 988
            .|::.:..:|:...:.:.|.||.|..|:|..||.|.:.:.|..|..|...|:.:.|..||.::..
Mouse   578 TVQTTLERLSAVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVG 642

  Fly   989 WVNVSTHVQAREVDRYTSRQQAEVVNLTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIA 1053
            |..|:|..:......|    .|.||.|:||..|||.|.|.|::|||.||.||.:..|....|.:|
Mouse   643 WQAVATVPEILNGQTY----NATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVA 703

  Fly  1054 PRNVGGGGGKIGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEIKKQDHMGVAVVN--- 1115
            |.|:.||||...:|.|||:.:..:.|:..|..|.|.::..|...|..:.:...:.......|   
Mouse   704 PGNINGGGGSRSELVITWEAIPEELQNGEGFGYIVMFRPVGTTAWMKERVALVESSKFIYRNESI 768

  Fly  1116 IPLNNYYTEYEVKVQAINSVGKGPESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 1180
            :||    :.:||||...|:.|:|..|.:.:::|.||.||:||:.....:::::...|:|..|..:
Mouse   769 MPL----SPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWN 829

  Fly  1181 RENIRGKLIGHRLKYWKTTHQEEDSVYYL----SRTTRNWALIVGLQPDTYYFVKVMAYNAAGEG 1241
            |..  |:::|:.:.|| |.:.:|..:..:    :.||:|   |.||:.:|.||..|.|||.||.|
Mouse   830 RNT--GRVLGYEVLYW-TDNSKESMIGKIRVSGNVTTKN---ITGLRANTIYFASVRAYNTAGTG 888

  Fly  1242 PESERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPVEGYKVRIWESDQ---NM 1303
            |.|......|.:..|.:||::: .:.::.|.:.:.|.:|...::|..|.|||:...::.|   ::
Mouse   889 PSSLPVNVTTKKSPPSQPPANI-AWKLSNSKLCLNWEHVKTMENESEVLGYKILYRQNRQSKTHI 952

  Fly  1304 ITANNT----IVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMS 1346
            :..|||    :||..:             .|.:.:...|:||||..|
Mouse   953 LETNNTSAELLVPFEE-------------DYLIEIRTVSDGGDGSSS 986

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ContNP_649461.2 CLECT 139..>223 CDD:214480
Ig 361..460 CDD:299845 33/98 (34%)
I-set 362..462 CDD:254352 34/100 (34%)
Ig 466..559 CDD:299845 34/94 (36%)
IG_like 584..657 CDD:214653 26/79 (33%)
IGc2 586..645 CDD:197706 20/64 (31%)
Ig 667..751 CDD:299845 24/83 (29%)
IG_like 676..751 CDD:214653 24/74 (32%)
IG_like 765..844 CDD:214653 23/78 (29%)
Ig 773..844 CDD:299845 23/70 (33%)
I-set 851..940 CDD:254352 21/98 (21%)
Ig 866..944 CDD:299845 19/87 (22%)
FN3 944..1043 CDD:238020 38/98 (39%)
FN3 1053..1146 CDD:238020 28/95 (29%)
fn3 1156..1244 CDD:278470 29/91 (32%)
fn3 1259..1346 CDD:278470 22/93 (24%)
Cntn6NP_059079.2 Ig 26..120 CDD:416386 36/104 (35%)
Ig strand A 27..31 CDD:409353 1/3 (33%)
Ig strand A' 34..39 CDD:409353 2/4 (50%)
Ig strand B 45..53 CDD:409353 2/7 (29%)
Ig strand C 58..64 CDD:409353 3/5 (60%)
Ig strand C' 66..69 CDD:409353 0/2 (0%)
Ig strand D 76..80 CDD:409353 1/3 (33%)
Ig strand E 82..88 CDD:409353 3/5 (60%)
Ig strand F 95..104 CDD:409353 4/8 (50%)
Ig strand G 107..120 CDD:409353 6/12 (50%)
Ig 129..214 CDD:416386 30/84 (36%)
Ig strand A 130..135 CDD:409353 1/4 (25%)
Ig strand B 139..145 CDD:409353 1/5 (20%)
Ig strand C 153..159 CDD:409353 2/5 (40%)
Ig strand C' 164..166 CDD:409353 0/1 (0%)
Ig strand D 171..176 CDD:409353 3/4 (75%)
Ig strand E 179..183 CDD:409353 2/3 (67%)
Ig strand F 193..201 CDD:409353 4/7 (57%)
Ig strand G 203..214 CDD:409353 2/10 (20%)
Ig 227..315 CDD:416386 31/91 (34%)
Ig strand A 227..232 CDD:409353 2/4 (50%)
Ig strand A' 235..240 CDD:409353 1/4 (25%)
Ig strand B 243..252 CDD:409353 4/8 (50%)
Ig strand C 258..262 CDD:409353 0/3 (0%)
Ig strand C' 265..267 CDD:409353 0/1 (0%)
Ig strand D 276..279 CDD:409353 0/2 (0%)
Ig strand E 280..285 CDD:409353 1/4 (25%)
Ig strand F 293..301 CDD:409353 3/7 (43%)
Ig strand G 304..315 CDD:409353 3/11 (27%)
Ig 319..403 CDD:416386 24/88 (27%)
Ig strand A 319..322 CDD:409353 0/2 (0%)
Ig strand A' 326..330 CDD:409353 0/3 (0%)
Ig strand B 334..342 CDD:409353 1/7 (14%)
Ig strand C 348..353 CDD:409353 3/4 (75%)
Ig strand C' 355..358 CDD:409353 0/2 (0%)
Ig strand D 363..367 CDD:409353 1/3 (33%)
Ig strand E 369..374 CDD:409353 1/4 (25%)
Ig strand F 383..390 CDD:409353 4/6 (67%)
Ig strand G 394..403 CDD:409353 3/8 (38%)
Ig5_Contactin 408..496 CDD:409358 27/87 (31%)
Ig strand B 427..431 CDD:409358 1/3 (33%)
Ig strand C 440..444 CDD:409358 0/3 (0%)
Ig strand E 462..466 CDD:409358 2/3 (67%)
Ig strand F 476..481 CDD:409358 3/4 (75%)
Ig strand G 489..492 CDD:409358 1/2 (50%)
Ig 500..598 CDD:416386 22/104 (21%)
Ig strand A' 507..512 CDD:409353 0/4 (0%)
Ig strand B 515..523 CDD:409353 3/7 (43%)
Ig strand C 532..536 CDD:409353 1/3 (33%)
Ig strand E 560..564 CDD:409353 1/3 (33%)
Ig strand F 573..580 CDD:409353 3/6 (50%)
Ig strand G 587..591 CDD:409353 1/3 (33%)
FN3 598..691 CDD:238020 37/96 (39%)
FN3 703..796 CDD:238020 28/96 (29%)
FN3 805..898 CDD:238020 30/98 (31%)
FN3 903..983 CDD:214495 21/93 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I9267
eggNOG 1 0.900 - - E1_KOG3513
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 495 1.000 Inparanoid score I1379
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46028
OrthoDB 1 1.010 - - D292460at33208
OrthoFinder 1 1.000 - - FOG0000550
OrthoInspector 1 1.000 - - otm43749
orthoMCL 1 0.900 - - OOG6_100978
Panther 1 1.100 - - O PTHR10075
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3370
SonicParanoid 1 1.000 - - X342
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.870

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