DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cont and cntn1a

DIOPT Version :10

Sequence 1:NP_649461.2 Gene:Cont / 40553 FlyBaseID:FBgn0037240 Length:1390 Species:Drosophila melanogaster
Sequence 2:NP_851300.2 Gene:cntn1a / 353150 ZFINID:ZDB-GENE-030427-1 Length:1032 Species:Danio rerio


Alignment Length:1046 Identity:297/1046 - (28%)
Similarity:466/1046 - (44%) Gaps:146/1046 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 GPYFVKQPNDTTFDVNKNRLINDVTLSCLANGYPTPSYTWYREVYVDDRLEYQKI------DPLA 419
            ||.|.:||.||.:......  ..:||:|.....|..||.|        ||...::      ||  
Zfish    45 GPVFEEQPLDTIYPEESPE--EKITLTCRTRANPPASYRW--------RLNNAELVLAEGGDP-- 97

  Fly   420 QDRYTISGGNLIIYEPKQALDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNL-KRSAETSEMNW 483
              .|::|.|||:|..|.::...|.|.|||.|::|.:.|..|.:.||::..|:. :|.|...:...
Zfish    98 --HYSVSEGNLLISSPDKSKHAGNYTCVASNQYGSVTSRRARVQFGYLDMFSTDEREAVYVKEGQ 160

  Fly   484 GKSIFCDPPQHYP-DVRYYWARDYFPNFVEEDQRVFVSRD-GALYFSFIETVDRANYSCTVQTLV 546
            |..:.|.||.|:| |:.:.|..:.||.|:..|||.|||:. |.||.|.:.:.|..||||.|.:  
Zfish   161 GAVLLCAPPPHFPEDLSFRWMLNEFPEFIPLDQRRFVSQSTGNLYISTVRSTDSGNYSCFVSS-- 223

  Fly   547 SDTGRNGPFFPLRVTPNSNYQALIFANTFPKVFPEAPVA----------------------GDEI 589
                                 ..|..:.|.|..|..|:|                      |..|
Zfish   224 ---------------------PAIAKSVFSKFIPLVPIAERSLRKYPADIKVKSPDSWALLGQNI 267

  Fly   590 RLECMAFGYPIPSYNWTRQG--LPLQRNAYTINYGRVLIIQNATTNDNGEYSCTITNPRKTLMKS 652
            .|||.|.|.|||...|.:..  ||..|:..::: |.:|.:.:....|.|.|.|...|.:......
Zfish   268 TLECFALGNPIPQIRWRKLDGVLPPLRHDVSMS-GALLHLYSLQYEDEGLYECEADNSKGKDWHK 331

  Fly   653 IYINIQMRPQFTIPLKDMIKDYNSDVTFICEAFAIPDANYTWYKNAERLDPANINRDRYIIQDNV 717
            .::.::..|.:...:.....|...|....|:|...|..:..:.||.......:            
Zfish   332 THLYVEGAPDWLEQISSSEVDIGGDYIMSCQASGKPKPHVHFLKNGHMYMKGH------------ 384

  Fly   718 LTIKFLEKD-KDDAMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDP 781
             .::|.... :|..||||.|:|:.....::|:|||.:..|||:.:|::.::....||.....|.|
Zfish   385 -EVRFSRLGFEDSGMYQCVAENRHGVIHANAELRVFASAPSFQYNPVKPKLLGARNGRVVFECRP 448

  Fly   782 EAAPRPKFQWKKDGQVIGSGGHRRILPSGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVLQ 846
            .|||||...|.|..:::.:.....|...|:|.:...|:.|||.|||.|.|..|...|...:.:..
Zfish   449 RAAPRPNITWSKGTELLHNSSRISIWLDGSLELLNISKSDEGKYTCFAENDRGRANSTGSLSITD 513

  Fly   847 EIRFIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHNGEVLKNNHD------------GTG 899
            ..:....|....||...| ..:.|.|:.|..||:.::|..:|..:....|            ||.
Zfish   514 ATKITLAPSNADVSVGED-ARMECVASHDPGLDLTFIWSLDGHTIDLQRDAQHYQRKMDSASGTS 577

  Fly   900 RIIVDWNRLTVHNTSMRDAGDYECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEW 964
            .     :.|.:.:|.:|.||.|.|..::.|:..::...:.:.|.||.||||:|.:::.....:.|
Zfish   578 S-----SELLITHTQLRHAGRYSCTAQTPVDNTTASAELVVRGPPGPPGGVRVDEVTSDSVRVLW 637

  Fly   965 VDGSHNGRAIRYYNI-LGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVNLTPWSAYEFSVTAV 1028
            ..|:.|...|..|.: |..:...:.|.:.:|    ..|:...:.:.|.||||.||:.|||.|.|.
Zfish   638 SHGTDNLSPISRYTVQLRESAAQQDWRDAAT----SPVNVEGNAEMATVVNLLPWTEYEFRVIAT 698

  Fly  1029 NDLGIGTPSAPSPIYSTYEDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIHYKVFWKLK 1093
            |.||.|.||.|||..:|.|.:|.:||.::|||||...:|||||.|:..|..:.....|.:.:|..
Zfish   699 NTLGTGPPSEPSPKTTTREARPIVAPSDIGGGGGTSRELTITWTPVQSQYYYGSNFGYIIAFKPH 763

  Fly  1094 GAIEW-----ASDEIKKQDHMGVAVVNIPLNNYYTEYEVKVQAINSVGKGPESEIAVIHSAEDMP 1153
            ...||     ...|::|..|..   ..||.:   |.:|||::|.||.|:||.|..|.|:||:|:|
Zfish   764 NDPEWLRVTVTDPEVQKYVHKD---PKIPPS---TRFEVKMKAFNSQGEGPFSNSAFIYSAQDVP 822

  Fly  1154 QVAPQKPIALAYNSTCFNVTWQPIDMSRENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR-NWA 1217
            ..||....|.|.::|...|.|.|:.:.      .:..::::||:.:.:.|.|...:..::| |..
Zfish   823 AEAPIITEARALSATEAIVIWVPVQLP------TVERYQVRYWRESVENEASAQRVLVSSRENHT 881

  Fly  1218 LIVGLQPDTYYFVKVMAYNAAGEGPESERFEERTYRKAPQKPP----SSVHVYGINPSTVRVVWR 1278
            .:..::||::|.|:|.|.|.||.||.|:|....|.:..|.:||    :.:|..|   |::.:.|.
Zfish   882 RLDNMKPDSHYLVEVRACNGAGYGPASQRNRIYTKKSPPSRPPKIISTKMHYSG---SSINIAWE 943

  Fly  1279 YVSPSQDEEPVEGYKVRIWESDQ---NMITANNTIVPIGQKLESYINNLTPGKSYNMRVLAYSNG 1340
            .|....:|..|.||||...:..|   .:.|.....:.:..:...|:          :.|.|:|.|
Zfish   944 KVESLNNESTVAGYKVLYRQHGQPSGTLYTTEKQSIDLPMRRGEYL----------VEVRAHSEG 998

  Fly  1341 GDGRMS 1346
            |||.::
Zfish   999 GDGAVA 1004

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ContNP_649461.2 CLECT 139..>223 CDD:214480
Ig 361..466 CDD:472250 35/110 (32%)
Ig strand B 384..388 CDD:409356 2/3 (67%)
Ig strand C 397..409 CDD:409356 3/11 (27%)
Ig strand E 428..432 CDD:409356 3/3 (100%)
Ig strand F 443..448 CDD:409356 2/4 (50%)
Ig strand G 457..460 CDD:409356 1/2 (50%)
Ig 474..559 CDD:472250 29/86 (34%)
Ig strand B 485..489 CDD:409392 0/3 (0%)
Ig strand C 499..503 CDD:409392 0/3 (0%)
Ig strand E 523..527 CDD:409392 2/3 (67%)
Ig strand F 537..542 CDD:409392 4/4 (100%)
Ig strand G 553..556 CDD:409392 0/2 (0%)
Ig_3 584..644 CDD:464046 21/83 (25%)
Ig_3 660..738 CDD:464046 15/78 (19%)
Ig 756..844 CDD:472250 29/87 (33%)
Ig strand B 775..779 CDD:409358 0/3 (0%)
Ig strand C 788..792 CDD:409358 0/3 (0%)
Ig strand E 810..814 CDD:409358 2/3 (67%)
Ig strand F 824..829 CDD:409358 3/4 (75%)
Ig strand G 837..840 CDD:409358 1/2 (50%)
Ig <868..944 CDD:472250 19/87 (22%)
Ig strand C 881..885 CDD:409359 0/3 (0%)
Ig strand E 906..910 CDD:409359 1/3 (33%)
Ig strand F 920..925 CDD:409359 2/4 (50%)
Ig strand G 933..936 CDD:409359 0/2 (0%)
FN3 944..1043 CDD:238020 37/99 (37%)
FN3 1053..1146 CDD:238020 35/97 (36%)
fn3 1156..1244 CDD:394996 25/88 (28%)
fn3 1259..1346 CDD:394996 23/93 (25%)
cntn1aNP_851300.2 Ig 45..142 CDD:472250 35/110 (32%)
Ig strand B 66..70 CDD:409353 2/3 (67%)
Ig strand C 79..83 CDD:409353 3/11 (27%)
Ig strand E 104..108 CDD:409353 3/3 (100%)
Ig strand F 119..124 CDD:409353 2/4 (50%)
Ig strand G 133..136 CDD:409353 1/2 (50%)
Ig 150..237 CDD:472250 32/109 (29%)
Ig strand B 162..166 CDD:409353 0/3 (0%)
Ig strand C 177..181 CDD:409353 0/3 (0%)
Ig strand E 202..206 CDD:409353 2/3 (67%)
Ig strand F 216..221 CDD:409353 4/4 (100%)
Ig strand G 232..235 CDD:409353 1/2 (50%)
Ig 249..337 CDD:472250 21/88 (24%)
Ig strand B 267..271 CDD:143259 2/3 (67%)
Ig strand C 280..284 CDD:143259 0/3 (0%)
Ig strand E 302..306 CDD:143259 1/3 (33%)
Ig strand F 316..321 CDD:143259 2/4 (50%)
Ig strand G 329..332 CDD:143259 0/2 (0%)
Ig 341..418 CDD:472250 17/89 (19%)
Ig strand B 357..361 CDD:143205 0/3 (0%)
Ig strand C 370..374 CDD:143205 0/3 (0%)
Ig strand E 384..388 CDD:143205 0/16 (0%)
Ig strand F 398..403 CDD:143205 4/4 (100%)
Ig strand G 411..414 CDD:143205 0/2 (0%)
Ig 423..511 CDD:472250 29/87 (33%)
Ig strand B 442..446 CDD:409353 0/3 (0%)
Ig strand C 455..459 CDD:409353 0/3 (0%)
Ig strand E 477..481 CDD:409353 2/3 (67%)
Ig strand F 491..496 CDD:409353 3/4 (75%)
Ig strand G 504..507 CDD:409353 1/2 (50%)
Ig 513..611 CDD:472250 22/103 (21%)
Ig strand B 532..536 CDD:409353 0/3 (0%)
Ig strand C 547..551 CDD:409353 0/3 (0%)
Ig strand E 579..583 CDD:409353 1/3 (33%)
Ig strand F 593..598 CDD:409353 2/4 (50%)
FN3 597..>962 CDD:442628 124/383 (32%)
Ig strand G 606..609 CDD:409353 0/2 (0%)
FN3 627..714 CDD:238020 30/90 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 699..729 14/29 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 907..926 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.