DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cont and robo3

DIOPT Version :10

Sequence 1:NP_649461.2 Gene:Cont / 40553 FlyBaseID:FBgn0037240 Length:1390 Species:Drosophila melanogaster
Sequence 2:NP_608592.2 Gene:robo3 / 33314 FlyBaseID:FBgn0041097 Length:1342 Species:Drosophila melanogaster


Alignment Length:50 Identity:14/50 - (28%)
Similarity:19/50 - (38%) Gaps:11/50 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 RIPGLGCFVAKSSADEKSTSLSHIWDVILYFYNL-----KTGRDTTDAPV 429
            ||.|||..|...:...::....|      .|:|:     .||.....|||
  Fly    26 RIQGLGEVVGSETVTARTQQRVH------QFFNIPYAEAPTGARRFRAPV 69

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ContNP_649461.2 CLECT 139..>223 CDD:214480
Ig 361..466 CDD:472250 13/49 (27%)
Ig strand B 384..388 CDD:409356 2/2 (100%)
Ig strand C 397..409 CDD:409356 1/11 (9%)
Ig strand E 428..432 CDD:409356 1/1 (100%)
Ig strand F 443..448 CDD:409356
Ig strand G 457..460 CDD:409356
Ig 474..559 CDD:472250
Ig strand B 485..489 CDD:409392
Ig strand C 499..503 CDD:409392
Ig strand E 523..527 CDD:409392
Ig strand F 537..542 CDD:409392
Ig strand G 553..556 CDD:409392
Ig_3 584..644 CDD:464046
Ig_3 660..738 CDD:464046
Ig 756..844 CDD:472250
Ig strand B 775..779 CDD:409358
Ig strand C 788..792 CDD:409358
Ig strand E 810..814 CDD:409358
Ig strand F 824..829 CDD:409358
Ig strand G 837..840 CDD:409358
Ig <868..944 CDD:472250
Ig strand C 881..885 CDD:409359
Ig strand E 906..910 CDD:409359
Ig strand F 920..925 CDD:409359
Ig strand G 933..936 CDD:409359
FN3 944..1043 CDD:238020
FN3 1053..1146 CDD:238020
fn3 1156..1244 CDD:394996
fn3 1259..1346 CDD:394996
robo3NP_608592.2 Ig 23..117 CDD:472250 13/49 (27%)
Ig strand B 40..44 CDD:409353 0/3 (0%)
Ig strand C 53..57 CDD:409353 0/3 (0%)
Ig strand E 77..81 CDD:409353
Ig strand F 95..100 CDD:409353
Ig strand G 109..112 CDD:409353
Ig 124..211 CDD:472250
Ig strand B 138..142 CDD:409353
Ig strand C 152..156 CDD:409353
Ig strand E 176..180 CDD:409353
Ig strand F 190..195 CDD:409353
Ig strand G 204..207 CDD:409353
Ig 218..302 CDD:472250
Ig strand B 232..236 CDD:409353
Ig strand C 245..249 CDD:409353
Ig strand E 268..272 CDD:409353
Ig strand F 282..287 CDD:409353
Ig strand G 295..298 CDD:409353
Ig 307..403 CDD:472250
Ig strand B 323..327 CDD:409353
Ig strand C 336..340 CDD:409353
Ig strand E 366..372 CDD:409353
Ig strand F 382..388 CDD:409353
Ig strand G 396..399 CDD:409353
Ig 413..497 CDD:472250
Ig strand B 429..433 CDD:409353
Ig strand C 442..446 CDD:409353
Ig strand E 464..468 CDD:409353
Ig strand F 479..484 CDD:409353
Ig strand G 492..495 CDD:409353
FN3 519..612 CDD:238020
FN3 644..735 CDD:238020
fn3 743..832 CDD:394996
Blue background indicates that the domain is not in the aligned region.

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