DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cont and cntn2

DIOPT Version :10

Sequence 1:NP_649461.2 Gene:Cont / 40553 FlyBaseID:FBgn0037240 Length:1390 Species:Drosophila melanogaster
Sequence 2:NP_571521.1 Gene:cntn2 / 30726 ZFINID:ZDB-GENE-990630-12 Length:1040 Species:Danio rerio


Alignment Length:1015 Identity:311/1015 - (30%)
Similarity:466/1015 - (45%) Gaps:84/1015 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 GPYFVKQPNDTTFDVNKNRLINDVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQDRYTI 425
            ||.|.:||:...:......  ..|||.|.|...|...|.|        |:....|....:..||.
Zfish    33 GPVFEEQPSSLIYPEGMPE--GKVTLGCQARSSPAAVYRW--------RVNGTDISFAEESHYTQ 87

  Fly   426 SGGNLIIYEPKQALDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNLK-RSAETSEMNWGKSIFC 489
            ..|||:|..|:...|.|:|.|:|.|:.|.|.|..|:|.||::.:|..: ||.:|.....|..:.|
Zfish    88 VAGNLVINNPQNGRDGGSYQCLAINRCGTIVSRVANLKFGYLRDFPPESRSPQTVHEGMGTFLAC 152

  Fly   490 DPPQHYPDVRYYWARDYFPNFVE-EDQRVFVSR-DGALYFSFIETVDRANYSC--TVQTLVSDTG 550
            .||.|||.:.|.|..:.||||:: |..|.|||: .|.||.:.....|..||.|  |:...||...
Zfish   153 QPPAHYPALSYRWFINEFPNFIQPEAGRWFVSQVTGNLYLANARANDTGNYFCFTTINMDVSTKS 217

  Fly   551 RNGPFFPLRVTPNSNYQALIFANTFPKV---FPEAPVA--GDEIRLECMAFGYPIPSYNWTRQGL 610
            .......|.|.|:::.:     .|.|.:   ||....|  |...:|||.|:..|||...|.:...
Zfish   218 IFSKAVQLTVHPDASPR-----KTAPNIRVRFPAETYALSGQTAQLECFAYRNPIPKIRWRKVDG 277

  Fly   611 PLQRNAYTINYGRVLIIQNATTNDNGEYSCTITNPRKTLMKSIYINIQMRPQFTIPLKDMIKDYN 675
            .|.....|...|.:|||.....:|.|.|.|.:.|..........:::|.:|.:...:.|...:.:
Zfish   278 ILPPKVGTSVDGPILIIPELNFDDEGMYECEVYNSEGRETHQGRVSVQAQPDWLQVMSDSEVEIS 342

  Fly   676 SDVTFICEAFAIPDANYTWYKNAERLDPANINRDRYIIQDNVLTIKFLEKDKDDAMYQCGAQNQL 740
            |::.:.|.|...|.....|.:|...|    |.:||..:.:..|.|..|..: |..||||.|:|:.
Zfish   343 SELQWSCAAAGKPRPTIRWLRNGHAL----ITQDRVEVNNGRLKIANLALE-DSGMYQCVAENKH 402

  Fly   741 KTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGSGGHRR 805
            .|.:|:|:|||....|.|:.:|:...|.|...|...:.|.|.|||:|...|.:..:::.:.....
Zfish   403 STIYSNAELRVQVQAPDFRLNPVRKLVPAARGGQVKMECKPRAAPKPTLFWSRGTELLTNSTRIT 467

  Fly   806 ILPSGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHDLIFLHC 870
            :.|.|.|.|...||.|||.|||.|.|..|...|...:.|....:....|....:::..:.. |.|
Zfish   468 VTPDGILWIYNISRADEGKYTCFAENYLGKANSTGHLSVRDATKITLAPSNADINQGENAT-LQC 531

  Fly   871 EAAFDELLDIAYVWKHNGEVL----KNNH----DGTGRIIVDWNRLTVHNTSMRDAGDYECVVKS 927
            .|:.|..:|:.:.|..||..|    .|.|    :|...|    ..|.:.|..:..||.|.|..::
Zfish   532 HASHDPTMDLTFTWSLNGVPLDLEEPNGHYRRMEGKETI----GDLVIVNGQLSHAGTYTCTAQT 592

  Fly   928 AVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVDGSHNGRAIRYYNILGRTNWNRTWVNV 992
            .|:...:...:.:.|.||.|||:.|..::.|...:.|..|..|...|..|.||||::....|..:
Zfish   593 VVDSAMASAKLVVRGPPGPPGGLVVTSVNDTSVELRWSRGYDNHSPIGKYVILGRSSQTHDWKRM 657

  Fly   993 STHVQAREVDRYTSRQQAEVVNLTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIAPRNV 1057
            .|.....|    .:.:.|.|::|.||..|||.|.|.|.||.|.||.|||...|.|..|.:||..:
Zfish   658 RTDPANIE----GNAESARVIDLRPWMDYEFQVIASNILGSGEPSMPSPRAQTKEAAPTVAPSGL 718

  Fly  1058 GGGGGKIGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEIKKQDHMGVAVVNIPLNNY- 1121
            |||||...:|.|||.|:..:.|:.....|.:.::.:|...|..          |.|.|:..:.| 
Zfish   719 GGGGGNRNELIITWTPMAREYQNGDSFGYILAFRKQGIPTWTV----------VKVPNVESSRYV 773

  Fly  1122 --------YTEYEVKVQAINSVGKGPESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPID 1178
                    |..:||:::|.|..|:||.|:|||:||||:.|.|:|:...|.|..:....|:|:|| 
Zfish   774 YSNDSLTAYCPFEVRIKAYNKKGEGPFSQIAVVHSAEEEPTVSPRWINATALTAFEIQVSWEPI- 837

  Fly  1179 MSRENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTRNWALIVGLQPDTYYFVKVMAYNAAGEGPE 1243
             ...||.|.|.|:.::||:...:|..:....:....|.|.:.||:|:|.|.:.|:|||:||.||.
Zfish   838 -QHLNINGVLRGYEIRYWRQHEREAAADRVRTAGLENTARVTGLRPNTLYHITVLAYNSAGTGPA 901

  Fly  1244 SERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPVEGYKVRIWESDQNMI---- 1304
            |.|....|.:..|.:||.:|. :.::.|.|.|.|.:|....:|..|.||||......|:.:    
Zfish   902 SPRTTVITKKPPPNRPPGNVS-WKVDGSWVTVRWDHVKSMDNESAVLGYKVLYKHEGQSALKVLE 965

  Fly  1305 -TANNTIVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDG 1343
             :..:..:|: .|...|:         .:.:.::.:||||
Zfish   966 KSKTSVKLPL-PKDNGYV---------VLEIRSWGDGGDG 995

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ContNP_649461.2 CLECT 139..>223 CDD:214480
Ig 361..466 CDD:472250 34/104 (33%)
Ig strand B 384..388 CDD:409356 3/3 (100%)
Ig strand C 397..409 CDD:409356 2/11 (18%)
Ig strand E 428..432 CDD:409356 3/3 (100%)
Ig strand F 443..448 CDD:409356 2/4 (50%)
Ig strand G 457..460 CDD:409356 1/2 (50%)
Ig 474..559 CDD:472250 31/88 (35%)
Ig strand B 485..489 CDD:409392 0/3 (0%)
Ig strand C 499..503 CDD:409392 1/3 (33%)
Ig strand E 523..527 CDD:409392 2/3 (67%)
Ig strand F 537..542 CDD:409392 3/6 (50%)
Ig strand G 553..556 CDD:409392 0/2 (0%)
Ig_3 584..644 CDD:464046 20/61 (33%)
Ig_3 660..738 CDD:464046 21/77 (27%)
Ig 756..844 CDD:472250 29/87 (33%)
Ig strand B 775..779 CDD:409358 0/3 (0%)
Ig strand C 788..792 CDD:409358 0/3 (0%)
Ig strand E 810..814 CDD:409358 2/3 (67%)
Ig strand F 824..829 CDD:409358 3/4 (75%)
Ig strand G 837..840 CDD:409358 1/2 (50%)
Ig <868..944 CDD:472250 21/83 (25%)
Ig strand C 881..885 CDD:409359 0/3 (0%)
Ig strand E 906..910 CDD:409359 1/3 (33%)
Ig strand F 920..925 CDD:409359 2/4 (50%)
Ig strand G 933..936 CDD:409359 0/2 (0%)
FN3 944..1043 CDD:238020 38/98 (39%)
FN3 1053..1146 CDD:238020 31/101 (31%)
fn3 1156..1244 CDD:394996 30/87 (34%)
fn3 1259..1346 CDD:394996 22/90 (24%)
cntn2NP_571521.1 Ig 32..128 CDD:472250 34/104 (33%)
Ig strand B 54..58 CDD:409353 3/3 (100%)
Ig strand C 67..71 CDD:409353 2/11 (18%)
Ig strand E 90..94 CDD:409353 3/3 (100%)
Ig strand F 105..110 CDD:409353 2/4 (50%)
Ig strand G 119..122 CDD:409353 1/2 (50%)
Ig 137..225 CDD:472250 31/87 (36%)
Ig strand B 148..152 CDD:409353 0/3 (0%)
Ig strand C 162..166 CDD:409353 1/3 (33%)
Ig strand E 188..192 CDD:409353 2/3 (67%)
Ig strand F 202..207 CDD:409353 3/4 (75%)
Ig strand G 220..223 CDD:409353 0/2 (0%)
Ig 238..325 CDD:472250 24/86 (28%)
Ig strand B 256..260 CDD:409353 1/3 (33%)
Ig strand C 269..273 CDD:409353 0/3 (0%)
Ig strand E 290..294 CDD:409353 1/3 (33%)
Ig strand F 304..309 CDD:409353 2/4 (50%)
Ig strand G 317..320 CDD:409353 0/2 (0%)
Ig 329..413 CDD:472250 25/88 (28%)
Ig strand B 345..349 CDD:409353 0/3 (0%)
Ig strand C 358..362 CDD:409353 0/3 (0%)
Ig strand E 379..383 CDD:409353 1/3 (33%)
Ig strand F 393..398 CDD:409353 4/4 (100%)
Ig strand G 406..409 CDD:409353 1/2 (50%)
Ig5_Contactin 418..506 CDD:409358 29/87 (33%)
Ig strand A 418..423 CDD:409358 2/4 (50%)
Ig strand A' 426..431 CDD:409358 1/4 (25%)
Ig strand B 435..442 CDD:409358 1/6 (17%)
Ig strand C 450..454 CDD:409358 0/3 (0%)
Ig strand D 468..471 CDD:409358 0/2 (0%)
Ig strand E 472..477 CDD:409358 2/4 (50%)
Ig strand F 485..493 CDD:409358 5/7 (71%)
Ig strand G 499..506 CDD:409358 1/6 (17%)
Ig6_Contactin-2 508..606 CDD:409440 21/102 (21%)
Ig strand A 508..514 CDD:409440 0/5 (0%)
Ig strand A' 517..522 CDD:409440 0/4 (0%)
Ig strand B 525..533 CDD:409440 2/8 (25%)
Ig strand C 542..546 CDD:409440 0/3 (0%)
Ig strand D 567..570 CDD:409440 0/2 (0%)
Ig strand E 571..575 CDD:409440 1/3 (33%)
Ig strand F 584..591 CDD:409440 3/6 (50%)
Ig strand G 598..602 CDD:409440 0/3 (0%)
FN3 615..702 CDD:238020 31/90 (34%)
FN3 <655..1039 CDD:442628 118/368 (32%)
FN3 817..909 CDD:238020 32/93 (34%)
Blue background indicates that the domain is not in the aligned region.

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