DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cont and Cntn6

DIOPT Version :9

Sequence 1:NP_649461.2 Gene:Cont / 40553 FlyBaseID:FBgn0037240 Length:1390 Species:Drosophila melanogaster
Sequence 2:NP_037357.1 Gene:Cntn6 / 27256 RGDID:62008 Length:1028 Species:Rattus norvegicus


Alignment Length:1019 Identity:305/1019 - (29%)
Similarity:497/1019 - (48%) Gaps:92/1019 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   362 PYFVKQPNDTTFDVNKNRLINDVTLSCLANGYPTPSYTWYRE-VYVDDRLEYQKIDPLAQDRYTI 425
            |.|:::|.|..|.::.:|  :::.|||.|:|||:|.|.|.:. ..:|..:.|         .|.:
  Rat    26 PIFIQEPQDVIFPLDLSR--SEIILSCTASGYPSPHYRWKQNGTDIDFSMTY---------HYRL 79

  Fly   426 SGGNLIIYEPKQALDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNLK-RSAETSEMNWGKSIFC 489
            .||:|.|..|:...|.|.|.|:|.|..|.|.|..|.|.|.:|.:|..| ||..:.....|..:.|
  Rat    80 DGGSLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAYIEDFETKSRSTVSVREGQGVVLLC 144

  Fly   490 DPPQHYPDVRYYWARDYFPNFVEEDQRVFVSRD-GALYFSFIETVDRANYSCTVQTLVSDTGRNG 553
            .||.|:.::.|.|..:..|.:|:||:|.|||:: |.||.:.:|..|..||:|.|....:.....|
  Rat   145 GPPPHFGELSYDWTFNDNPLYVQEDKRRFVSQNTGNLYIAKVEPSDVGNYTCFVTNKEAHRSVQG 209

  Fly   554 PFFPLRVTPNSNYQALIFANTFPKV---FPEAPVAGDE--IRLECMAFGYPIPSYNWTR-QGLPL 612
            |..||....:.     :.....||:   |||...|..:  ::|||.|.|.|:|..:|.| .|.|:
  Rat   210 PPTPLVQRTDG-----VMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPM 269

  Fly   613 QRNAYTINYGRVLIIQNATTNDNGEYSCTITNPR-KTLMKSIYINIQMRPQFTIPLKDMIKDYNS 676
            .......|....|.|......|.|.|.|...|.| :.|.|...| ....|::...:::.......
  Rat   270 PGKVKYSNSQATLEIPKFQQEDEGFYECVAGNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYD 333

  Fly   677 DVTFICEAFAIPDANYTWYKNAERLDPANINRDRYIIQDNVLTIKFLEKDKDDAMYQCGAQNQLK 741
            .:.:.|:|...|:.:|||.||.|||:    ..:|...::..|.|..|.. .|..:|||.|:|:.:
  Rat   334 SLFWECKASGNPNPSYTWLKNGERLN----TEERIQTENGTLIITMLNV-SDSGIYQCAAENKYQ 393

  Fly   742 TSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGSGGHRRI 806
            |.:::|:||||:..|.|.|:|::........|:.:|.|.|.|.|:....||:..:.:........
  Rat   394 TIYANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKRVFF 458

  Fly   807 LPSGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHDLIFLHCE 871
            |..|:|.|...:|.|.|.|||:|:||.|..:|...:|| :|...|..||.::.....:.|.|.|:
  Rat   459 LEDGSLKICNVTRSDAGSYTCVATNQFGNGKSSGSLIV-KERTVITVPPSKMDVTVGESIVLPCQ 522

  Fly   872 AAFDELLDIAYVWKHNGEV--LKNNHDGTGRIIVDWNR--------LTVHNTSMRDAGDYECVVK 926
            .:.|..:::.:||..||:|  ||..       :..:.|        |.:.|..:..:|.|.|.|:
  Rat   523 VSHDPTMEVLFVWYFNGDVIDLKKG-------VAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQ 580

  Fly   927 SAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVDGSHNGRAIRYYNILGRTNWNRTWVN 991
            :.:..:|:...:.:.|.||.|..|:|..||.|.:.:.|..|..|...|:.:.|..||.::..|..
  Rat   581 TTLERLSAVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQA 645

  Fly   992 VSTHVQAREVDRYTSRQQAEVVNLTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIAPRN 1056
            |:|..:......|    .|.|:.|:||..|||.|.|.|::|||.||.||.:..|....|.:||.|
  Rat   646 VATVPEILNGQTY----NATVIGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPVN 706

  Fly  1057 VGGGGGKIGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEIKKQDHMGVAVVN---IPL 1118
            :.||||...:|.|||:|:..:.|:..|..|.:.::..|:..|..:::...:.......|   :||
  Rat   707 INGGGGSRSELVITWEPIPEELQNGEGFGYIIMFRPVGSTTWMKEKVALVESSKFIYRNESIMPL 771

  Fly  1119 NNYYTEYEVKVQAINSVGKGPESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMSREN 1183
                :.:||||...|:.|:|..|.:::::|.||.|::||:.....:::::...|:|..|..:|..
  Rat   772 ----SPFEVKVGVYNNEGEGSLSTVSIVYSGEDEPRLAPRGTSVQSFSASDMEVSWNAIAWNRNT 832

  Fly  1184 IRGKLIGHRLKYWKTTHQEEDSVYYL----SRTTRNWALIVGLQPDTYYFVKVMAYNAAGEGPES 1244
              |:::|:.:.|| |.:.:|..:..:    :.||:|   |.||:.:|.||..|.|||.||.||.|
  Rat   833 --GRVLGYEVLYW-TDNSKESMIGKIRVSGNVTTKN---ITGLRANTIYFASVRAYNTAGTGPSS 891

  Fly  1245 ERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPVEGYKVRIWESDQ---NMITA 1306
            ......|.:..|.:||::: .:.::.|.:.:.|.:|...::|..|.|||:...::.|   :::..
  Rat   892 PPVNVTTKKSPPSQPPANI-AWKLSNSKLCLNWEHVKTMENESEVLGYKILYRQNRQSKTHVLET 955

  Fly  1307 NNT----IVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMS 1346
            |||    :||..:             .|.:.:...|:||||..|
  Rat   956 NNTSAELLVPFEE-------------DYLIEIRTVSDGGDGSSS 986

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ContNP_649461.2 CLECT 139..>223 CDD:214480
Ig 361..460 CDD:299845 33/98 (34%)
I-set 362..462 CDD:254352 34/100 (34%)
Ig 466..559 CDD:299845 32/94 (34%)
IG_like 584..657 CDD:214653 24/76 (32%)
IGc2 586..645 CDD:197706 18/61 (30%)
Ig 667..751 CDD:299845 24/83 (29%)
IG_like 676..751 CDD:214653 24/74 (32%)
IG_like 765..844 CDD:214653 23/78 (29%)
Ig 773..844 CDD:299845 23/70 (33%)
I-set 851..940 CDD:254352 22/98 (22%)
Ig 866..944 CDD:299845 20/87 (23%)
FN3 944..1043 CDD:238020 37/98 (38%)
FN3 1053..1146 CDD:238020 28/95 (29%)
fn3 1156..1244 CDD:278470 29/91 (32%)
fn3 1259..1346 CDD:278470 22/93 (24%)
Cntn6NP_037357.1 Ig strand D 76..80 CDD:409353 1/3 (33%)
Ig strand E 82..88 CDD:409353 3/5 (60%)
Ig strand F 95..104 CDD:409353 4/8 (50%)
Ig strand G 107..120 CDD:409353 6/12 (50%)
Ig 129..214 CDD:416386 28/84 (33%)
Ig strand A 130..135 CDD:409353 1/4 (25%)
Ig strand B 139..145 CDD:409353 1/5 (20%)
Ig strand C 153..159 CDD:409353 2/5 (40%)
Ig strand C' 164..166 CDD:409353 0/1 (0%)
Ig strand D 171..176 CDD:409353 3/4 (75%)
Ig strand E 179..183 CDD:409353 2/3 (67%)
Ig strand F 193..201 CDD:409353 4/7 (57%)
Ig strand G 203..214 CDD:409353 2/10 (20%)
Ig 227..315 CDD:416386 29/88 (33%)
Ig strand A 227..232 CDD:409353 2/4 (50%)
Ig strand A' 235..240 CDD:409353 1/4 (25%)
Ig strand B 243..252 CDD:409353 3/8 (38%)
Ig strand C 258..262 CDD:409353 0/3 (0%)
Ig strand C' 265..267 CDD:409353 0/1 (0%)
Ig strand D 276..279 CDD:409353 1/2 (50%)
Ig strand E 280..285 CDD:409353 1/4 (25%)
Ig strand F 293..301 CDD:409353 3/7 (43%)
Ig strand G 304..315 CDD:409353 3/11 (27%)
Ig 319..403 CDD:416386 24/88 (27%)
Ig strand A 319..322 CDD:409353 0/2 (0%)
Ig strand A' 326..330 CDD:409353 0/3 (0%)
Ig strand B 334..342 CDD:409353 1/7 (14%)
Ig strand C 348..353 CDD:409353 3/4 (75%)
Ig strand C' 355..358 CDD:409353 1/2 (50%)
Ig strand D 363..367 CDD:409353 1/3 (33%)
Ig strand E 369..374 CDD:409353 1/4 (25%)
Ig strand F 383..390 CDD:409353 4/6 (67%)
Ig strand G 394..403 CDD:409353 3/8 (38%)
Ig5_Contactin 408..496 CDD:409358 27/87 (31%)
Ig strand B 427..431 CDD:409358 1/3 (33%)
Ig strand C 440..444 CDD:409358 0/3 (0%)
Ig strand E 462..466 CDD:409358 2/3 (67%)
Ig strand F 476..481 CDD:409358 3/4 (75%)
Ig strand G 489..492 CDD:409358 1/2 (50%)
Ig 500..598 CDD:416386 23/104 (22%)
Ig strand A' 507..512 CDD:409353 0/4 (0%)
Ig strand B 515..523 CDD:409353 3/7 (43%)
Ig strand C 532..536 CDD:409353 1/3 (33%)
Ig strand E 560..564 CDD:409353 1/3 (33%)
Ig strand F 573..580 CDD:409353 3/6 (50%)
Ig strand G 587..591 CDD:409353 1/3 (33%)
FN3 598..691 CDD:238020 36/96 (38%)
FN3 703..796 CDD:238020 28/96 (29%)
FN3 805..898 CDD:238020 30/98 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 887..908 6/20 (30%)
FN3 903..983 CDD:214495 21/93 (23%)
Ig 26..120 CDD:416386 36/104 (35%)
Ig strand A 27..31 CDD:409353 1/3 (33%)
Ig strand A' 34..39 CDD:409353 2/4 (50%)
Ig strand B 45..53 CDD:409353 3/7 (43%)
Ig strand C 58..64 CDD:409353 3/5 (60%)
Ig strand C' 66..69 CDD:409353 0/2 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I9086
eggNOG 1 0.900 - - E1_KOG3513
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 503 1.000 Inparanoid score I1297
OMA 1 1.010 - - QHG46028
OrthoDB 1 1.010 - - D292460at33208
OrthoFinder 1 1.000 - - FOG0000550
OrthoInspector 1 1.000 - - otm45829
orthoMCL 1 0.900 - - OOG6_100978
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X342
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.740

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