DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cont and Cntn2

DIOPT Version :10

Sequence 1:NP_649461.2 Gene:Cont / 40553 FlyBaseID:FBgn0037240 Length:1390 Species:Drosophila melanogaster
Sequence 2:NP_037016.2 Gene:Cntn2 / 25356 RGDID:3821 Length:1040 Species:Rattus norvegicus


Alignment Length:1038 Identity:322/1038 - (31%)
Similarity:491/1038 - (47%) Gaps:100/1038 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 GPYFVKQPNDTTFDVNKNRLINDVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQDRYTI 425
            ||.|.:||....|.  :....:.|||:|.|...|..:|.| :....|..||       ...|:.:
  Rat    38 GPIFEEQPIGLLFP--EESAEDQVTLACRARASPPATYRW-KMNGTDMNLE-------PGSRHQL 92

  Fly   426 SGGNLIIYEPKQALDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNL-KRSAETSEMNWGKSIFC 489
            .||||:|..|.:..|.|.|.|:|.|..|.:.|:.|.|.|||:.||:. :|....:...||..:.|
  Rat    93 MGGNLVIMSPTKTQDAGVYQCLASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKTHEGWGVMLPC 157

  Fly   490 DPPQHYPDVRYYWARDYFPNFVEEDQRVFVSR-DGALYFSFIETVDRANYSCTVQTLVSDTGRNG 553
            :||.|||.:.|.|..:.||||:..|.|.|||: .|.||.:.....|..|||| :.|...|.....
  Rat   158 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSC-LATSHMDFSTKS 221

  Fly   554 PFFPLRVTPNSNYQALIFANTFPKVF---------PEA-PVAGDEIRLECMAFGYPIPSYNWTRQ 608
            .|        |.:..|..|...|::|         ||. .:.|.::.|||.|||.|:|...|.:.
  Rat   222 VF--------SKFAQLNLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFGNPVPRIKWRKV 278

  Fly   609 GLPLQRNAYTINYGRVLIIQNATTNDNGEYSCTITNP--RKTLMKSIYINIQMRPQFTIPLKDMI 671
            ...|.....|..  ..|.|.:.:..|.|.|.|...|.  |.|:...|.  :|.:|::...:.|..
  Rat   279 DGSLSPQWATAE--PTLQIPSVSFEDEGTYECEAENSKGRDTVQGRII--VQAQPEWLKVISDTE 339

  Fly   672 KDYNSDVTFICEAFAIPDANYTWYKNAERLDPANINRDRYIIQDNVLTIKFLEKD-KDDAMYQCG 735
            .|..|::.:.|.|...|.....|.:|.|.|  |:.||...:..|    ::|.:.. :|..||||.
  Rat   340 ADIGSNLRWGCAAAGKPRPMVRWLRNGEPL--ASQNRVEVLAGD----LRFSKLSLEDSGMYQCV 398

  Fly   736 AQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGS 800
            |:|:..|.::||:|.|.::.|.|:::|:...:.|...|..:|:|.|.|||:....|.|..:::|:
  Rat   399 AENKHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISILCQPRAAPKATILWSKGTEILGN 463

  Fly   801 GGHRRILPSGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHDL 865
            .....:...|||.|...||.|||.|||.|.|..|...| ..::.:::...|...|........|.
  Rat   464 STRVTVTSDGTLIIRNISRSDEGKYTCFAENFMGKANS-TGILSVRDATKITLAPSSADINVGDN 527

  Fly   866 IFLHCEAAFDELLDIAYVW----------KHNGEVLKNNHDGTGRIIVDWNRLTVHNTSMRDAGD 920
            :.|.|.|:.|..:|:.:.|          |..|...:.:...|   |.|   ||:.|..:|..|.
  Rat   528 LTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRASAKET---IGD---LTILNAQLRHGGK 586

  Fly   921 YECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVDGSHNGRAIRYYNILGRTNW 985
            |.|:.::.|:..|.:.:|.:.|.||.||||.|..|..|...:.|..|..|...|..|.:..||..
  Rat   587 YTCMAQTVVDGTSKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTPP 651

  Fly   986 NRTWVNVSTHVQAREVDRYTSRQQAEVVNLTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKP 1050
            :..|..|.|:    .|:...:.:.|:|:.|.||..|||.|:|.|.||.|.||.||....|.|..|
  Rat   652 SGKWKQVRTN----PVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSKIRTKEAVP 712

  Fly  1051 YIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEIKKQDHMGVAVVN 1115
            .:||..:.||||..|:|.|.|.|:..:.|:..|..|.:.::.:|:..|.:..:...|.......|
  Rat   713 SVAPSGLSGGGGAPGELIINWTPVSREYQNGDGFGYLLSFRRQGSSSWQTARVPGADAQYFVYGN 777

  Fly  1116 IPLNNYYTEYEVKVQAINSVGKGPESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 1180
            ..:.. ||.:|||:::.|..|.||||..|:::|||:.|:|||.|..|...:|:..||:|:|:   
  Rat   778 DSIQP-YTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPAKVWAKGSSSSEMNVSWEPV--- 838

  Fly  1181 RENIRGKLIGHRLKYWKTTHQE--EDSVYYLSRTTRNWALIVGLQPDTYYFVKVMAYNAAGEGPE 1243
            .:::.|.|:|:.::|||....|  .|.|......|.  |.:.||.|:|.|.|.|.|||.||.||.
  Rat   839 LQDMNGILLGYEIRYWKAGDNEAAADRVRTAGLDTS--ARVTGLNPNTKYHVTVRAYNRAGTGPA 901

  Fly  1244 SERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPVEGYKVRIWESDQN-----M 1303
            |...:..|.:..|::||.::. :..:.|::.:.|..|.|.::|..|.|||: ::::|.:     .
  Rat   902 SPSADAMTVKPPPRRPPGNIS-WTFSSSSLSLKWDPVVPLRNESTVTGYKM-LYQNDLHPTPTLH 964

  Fly  1304 ITANNTI-VPIGQKL-ESYINNLTPGKSYNMRVLAYSNGGDGRMSSPTLHFQMGKTTRNGANT 1364
            :|:.|.| :|:.:.: .:.:...|.|.           ||||..:.  :|.     .|||..:
  Rat   965 LTSKNWIEIPVPEDIGHALVQIRTTGP-----------GGDGIPAE--VHI-----VRNGGTS 1009

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ContNP_649461.2 CLECT 139..>223 CDD:214480
Ig 361..466 CDD:472250 35/104 (34%)
Ig strand B 384..388 CDD:409356 3/3 (100%)
Ig strand C 397..409 CDD:409356 3/11 (27%)
Ig strand E 428..432 CDD:409356 3/3 (100%)
Ig strand F 443..448 CDD:409356 2/4 (50%)
Ig strand G 457..460 CDD:409356 1/2 (50%)
Ig 474..559 CDD:472250 31/85 (36%)
Ig strand B 485..489 CDD:409392 0/3 (0%)
Ig strand C 499..503 CDD:409392 1/3 (33%)
Ig strand E 523..527 CDD:409392 2/3 (67%)
Ig strand F 537..542 CDD:409392 4/4 (100%)
Ig strand G 553..556 CDD:409392 0/2 (0%)
Ig_3 584..644 CDD:464046 18/59 (31%)
Ig_3 660..738 CDD:464046 22/78 (28%)
Ig 756..844 CDD:472250 30/87 (34%)
Ig strand B 775..779 CDD:409358 1/3 (33%)
Ig strand C 788..792 CDD:409358 0/3 (0%)
Ig strand E 810..814 CDD:409358 3/3 (100%)
Ig strand F 824..829 CDD:409358 3/4 (75%)
Ig strand G 837..840 CDD:409358 1/2 (50%)
Ig <868..944 CDD:472250 22/85 (26%)
Ig strand C 881..885 CDD:409359 1/13 (8%)
Ig strand E 906..910 CDD:409359 1/3 (33%)
Ig strand F 920..925 CDD:409359 2/4 (50%)
Ig strand G 933..936 CDD:409359 1/2 (50%)
FN3 944..1043 CDD:238020 38/98 (39%)
FN3 1053..1146 CDD:238020 30/92 (33%)
fn3 1156..1244 CDD:394996 34/89 (38%)
fn3 1259..1346 CDD:394996 22/93 (24%)
Cntn2NP_037016.2 Ig 37..133 CDD:472250 35/104 (34%)
Ig strand B 59..63 CDD:409353 3/3 (100%)
Ig strand C 72..76 CDD:409353 2/4 (50%)
Ig strand E 95..99 CDD:409353 3/3 (100%)
Ig strand F 110..115 CDD:409353 2/4 (50%)
Ig strand G 124..127 CDD:409353 1/2 (50%)
Ig2_Contactin-2-like 141..230 CDD:409392 32/97 (33%)
Ig strand A 143..148 CDD:409392 0/4 (0%)
Ig strand B 152..158 CDD:409392 1/5 (20%)
Ig strand C 166..172 CDD:409392 2/5 (40%)
Ig strand C' 177..179 CDD:409392 1/1 (100%)
Ig strand D 184..189 CDD:409392 3/4 (75%)
Ig strand E 192..196 CDD:409392 2/3 (67%)
Ig strand F 206..214 CDD:409392 5/8 (63%)
Ig strand G 218..230 CDD:409392 2/19 (11%)
Ig 241..326 CDD:472250 24/88 (27%)
Ig strand B 259..263 CDD:409353 1/3 (33%)
Ig strand C 272..276 CDD:409353 0/3 (0%)
Ig strand E 291..295 CDD:409353 1/3 (33%)
Ig strand F 305..310 CDD:409353 2/4 (50%)
Ig strand G 318..321 CDD:409353 1/2 (50%)
Ig4_Contactin-2-like 330..414 CDD:143205 26/89 (29%)
Ig strand A 330..333 CDD:143205 0/2 (0%)
Ig strand A' 337..341 CDD:143205 1/3 (33%)
Ig strand B 345..353 CDD:143205 1/7 (14%)
Ig strand C 359..364 CDD:143205 1/4 (25%)
Ig strand C' 366..369 CDD:143205 1/2 (50%)
Ig strand D 374..378 CDD:143205 1/3 (33%)
Ig strand E 380..385 CDD:143205 1/8 (13%)
Ig strand F 394..401 CDD:143205 5/6 (83%)
Ig strand G 405..414 CDD:143205 4/8 (50%)
Ig5_Contactin 419..507 CDD:409358 30/88 (34%)
Ig strand A 419..424 CDD:409358 2/4 (50%)
Ig strand A' 427..432 CDD:409358 0/4 (0%)
Ig strand B 436..443 CDD:409358 2/6 (33%)
Ig strand C 451..455 CDD:409358 0/3 (0%)
Ig strand D 469..472 CDD:409358 0/2 (0%)
Ig strand E 473..478 CDD:409358 3/4 (75%)
Ig strand F 486..494 CDD:409358 5/7 (71%)
Ig strand G 500..507 CDD:409358 1/7 (14%)
Ig 509..605 CDD:472250 23/101 (23%)
Ig strand B 528..532 CDD:409353 1/3 (33%)
Ig strand C 543..547 CDD:409353 0/3 (0%)
Ig strand E 572..576 CDD:409353 2/6 (33%)
Ig strand F 586..591 CDD:409353 2/4 (50%)
Ig strand G 599..602 CDD:409353 1/2 (50%)
FN3 620..707 CDD:238020 31/90 (34%)
FN3 728..802 CDD:238020 20/74 (27%)
Cell attachment site. /evidence=ECO:0000255 796..798 0/1 (0%)
FN3 817..909 CDD:238020 35/96 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 895..921 9/25 (36%)
Blue background indicates that the domain is not in the aligned region.

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