DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cont and Cntn2

DIOPT Version :9

Sequence 1:NP_649461.2 Gene:Cont / 40553 FlyBaseID:FBgn0037240 Length:1390 Species:Drosophila melanogaster
Sequence 2:NP_037016.2 Gene:Cntn2 / 25356 RGDID:3821 Length:1040 Species:Rattus norvegicus


Alignment Length:1038 Identity:322/1038 - (31%)
Similarity:491/1038 - (47%) Gaps:100/1038 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 GPYFVKQPNDTTFDVNKNRLINDVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQDRYTI 425
            ||.|.:||....|.  :....:.|||:|.|...|..:|.| :....|..||       ...|:.:
  Rat    38 GPIFEEQPIGLLFP--EESAEDQVTLACRARASPPATYRW-KMNGTDMNLE-------PGSRHQL 92

  Fly   426 SGGNLIIYEPKQALDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNL-KRSAETSEMNWGKSIFC 489
            .||||:|..|.:..|.|.|.|:|.|..|.:.|:.|.|.|||:.||:. :|....:...||..:.|
  Rat    93 MGGNLVIMSPTKTQDAGVYQCLASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKTHEGWGVMLPC 157

  Fly   490 DPPQHYPDVRYYWARDYFPNFVEEDQRVFVSR-DGALYFSFIETVDRANYSCTVQTLVSDTGRNG 553
            :||.|||.:.|.|..:.||||:..|.|.|||: .|.||.:.....|..|||| :.|...|.....
  Rat   158 NPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSC-LATSHMDFSTKS 221

  Fly   554 PFFPLRVTPNSNYQALIFANTFPKVF---------PEA-PVAGDEIRLECMAFGYPIPSYNWTRQ 608
            .|        |.:..|..|...|::|         ||. .:.|.::.|||.|||.|:|...|.:.
  Rat   222 VF--------SKFAQLNLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFGNPVPRIKWRKV 278

  Fly   609 GLPLQRNAYTINYGRVLIIQNATTNDNGEYSCTITNP--RKTLMKSIYINIQMRPQFTIPLKDMI 671
            ...|.....|..  ..|.|.:.:..|.|.|.|...|.  |.|:...|.  :|.:|::...:.|..
  Rat   279 DGSLSPQWATAE--PTLQIPSVSFEDEGTYECEAENSKGRDTVQGRII--VQAQPEWLKVISDTE 339

  Fly   672 KDYNSDVTFICEAFAIPDANYTWYKNAERLDPANINRDRYIIQDNVLTIKFLEKD-KDDAMYQCG 735
            .|..|::.:.|.|...|.....|.:|.|.|  |:.||...:..|    ::|.:.. :|..||||.
  Rat   340 ADIGSNLRWGCAAAGKPRPMVRWLRNGEPL--ASQNRVEVLAGD----LRFSKLSLEDSGMYQCV 398

  Fly   736 AQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGS 800
            |:|:..|.::||:|.|.::.|.|:::|:...:.|...|..:|:|.|.|||:....|.|..:::|:
  Rat   399 AENKHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISILCQPRAAPKATILWSKGTEILGN 463

  Fly   801 GGHRRILPSGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHDL 865
            .....:...|||.|...||.|||.|||.|.|..|...| ..::.:::...|...|........|.
  Rat   464 STRVTVTSDGTLIIRNISRSDEGKYTCFAENFMGKANS-TGILSVRDATKITLAPSSADINVGDN 527

  Fly   866 IFLHCEAAFDELLDIAYVW----------KHNGEVLKNNHDGTGRIIVDWNRLTVHNTSMRDAGD 920
            :.|.|.|:.|..:|:.:.|          |..|...:.:...|   |.|   ||:.|..:|..|.
  Rat   528 LTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRASAKET---IGD---LTILNAQLRHGGK 586

  Fly   921 YECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVDGSHNGRAIRYYNILGRTNW 985
            |.|:.::.|:..|.:.:|.:.|.||.||||.|..|..|...:.|..|..|...|..|.:..||..
  Rat   587 YTCMAQTVVDGTSKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTPP 651

  Fly   986 NRTWVNVSTHVQAREVDRYTSRQQAEVVNLTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKP 1050
            :..|..|.|:    .|:...:.:.|:|:.|.||..|||.|:|.|.||.|.||.||....|.|..|
  Rat   652 SGKWKQVRTN----PVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSKIRTKEAVP 712

  Fly  1051 YIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEIKKQDHMGVAVVN 1115
            .:||..:.||||..|:|.|.|.|:..:.|:..|..|.:.::.:|:..|.:..:...|.......|
  Rat   713 SVAPSGLSGGGGAPGELIINWTPVSREYQNGDGFGYLLSFRRQGSSSWQTARVPGADAQYFVYGN 777

  Fly  1116 IPLNNYYTEYEVKVQAINSVGKGPESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 1180
            ..:.. ||.:|||:::.|..|.||||..|:::|||:.|:|||.|..|...:|:..||:|:|:   
  Rat   778 DSIQP-YTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPAKVWAKGSSSSEMNVSWEPV--- 838

  Fly  1181 RENIRGKLIGHRLKYWKTTHQE--EDSVYYLSRTTRNWALIVGLQPDTYYFVKVMAYNAAGEGPE 1243
            .:::.|.|:|:.::|||....|  .|.|......|.  |.:.||.|:|.|.|.|.|||.||.||.
  Rat   839 LQDMNGILLGYEIRYWKAGDNEAAADRVRTAGLDTS--ARVTGLNPNTKYHVTVRAYNRAGTGPA 901

  Fly  1244 SERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPVEGYKVRIWESDQN-----M 1303
            |...:..|.:..|::||.::. :..:.|::.:.|..|.|.::|..|.|||: ::::|.:     .
  Rat   902 SPSADAMTVKPPPRRPPGNIS-WTFSSSSLSLKWDPVVPLRNESTVTGYKM-LYQNDLHPTPTLH 964

  Fly  1304 ITANNTI-VPIGQKL-ESYINNLTPGKSYNMRVLAYSNGGDGRMSSPTLHFQMGKTTRNGANT 1364
            :|:.|.| :|:.:.: .:.:...|.|.           ||||..:.  :|.     .|||..:
  Rat   965 LTSKNWIEIPVPEDIGHALVQIRTTGP-----------GGDGIPAE--VHI-----VRNGGTS 1009

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ContNP_649461.2 CLECT 139..>223 CDD:214480
Ig 361..460 CDD:299845 32/98 (33%)
I-set 362..462 CDD:254352 32/99 (32%)
Ig 466..559 CDD:299845 34/94 (36%)
IG_like 584..657 CDD:214653 22/74 (30%)
IGc2 586..645 CDD:197706 18/58 (31%)
Ig 667..751 CDD:299845 26/84 (31%)
IG_like 676..751 CDD:214653 24/75 (32%)
IG_like 765..844 CDD:214653 27/78 (35%)
Ig 773..844 CDD:299845 26/70 (37%)
I-set 851..940 CDD:254352 24/98 (24%)
Ig 866..944 CDD:299845 22/87 (25%)
FN3 944..1043 CDD:238020 38/98 (39%)
FN3 1053..1146 CDD:238020 30/92 (33%)
fn3 1156..1244 CDD:278470 34/89 (38%)
fn3 1259..1346 CDD:278470 22/93 (24%)
Cntn2NP_037016.2 Ig 37..133 CDD:416386 35/104 (34%)
Ig strand A 40..44 CDD:409353 1/3 (33%)
Ig strand A' 47..52 CDD:409353 1/6 (17%)
Ig strand B 58..66 CDD:409353 4/7 (57%)
Ig strand C 71..77 CDD:409353 2/6 (33%)
Ig strand C' 79..82 CDD:409353 0/2 (0%)
Ig strand D 89..93 CDD:409353 1/3 (33%)
Ig strand E 95..101 CDD:409353 4/5 (80%)
Ig strand F 108..117 CDD:409353 4/8 (50%)
Ig strand G 120..133 CDD:409353 5/12 (42%)
Ig2_Contactin-2-like 141..230 CDD:409392 32/97 (33%)
Ig strand B 153..157 CDD:409392 0/3 (0%)
Ig strand C 167..171 CDD:409392 1/3 (33%)
Ig strand E 192..196 CDD:409392 2/3 (67%)
Ig strand F 206..211 CDD:409392 4/5 (80%)
Ig strand G 224..227 CDD:409392 1/2 (50%)
Ig 241..326 CDD:416386 24/88 (27%)
Ig strand A 241..246 CDD:409353 0/4 (0%)
Ig strand A' 249..254 CDD:409353 2/4 (50%)
Ig strand B 257..266 CDD:409353 3/8 (38%)
Ig strand C 272..276 CDD:409353 0/3 (0%)
Ig strand C' 279..281 CDD:409353 0/1 (0%)
Ig strand E 291..296 CDD:409353 1/4 (25%)
Ig strand F 304..312 CDD:409353 3/7 (43%)
Ig strand G 315..326 CDD:409353 3/12 (25%)
Ig4_Contactin-2-like 330..414 CDD:143205 26/89 (29%)
Ig strand B 346..350 CDD:143205 0/3 (0%)
Ig strand C 359..363 CDD:143205 0/3 (0%)
Ig strand E 380..384 CDD:143205 1/7 (14%)
Ig strand F 394..399 CDD:143205 4/4 (100%)
Ig strand G 407..410 CDD:143205 0/2 (0%)
Ig5_Contactin 419..507 CDD:409358 30/88 (34%)
Ig strand B 438..442 CDD:409358 1/3 (33%)
Ig strand C 451..455 CDD:409358 0/3 (0%)
Ig strand E 473..477 CDD:409358 3/3 (100%)
Ig strand F 487..492 CDD:409358 3/4 (75%)
Ig strand G 500..503 CDD:409358 1/3 (33%)
Ig 509..605 CDD:416386 23/101 (23%)
Ig strand A 509..515 CDD:409353 1/5 (20%)
Ig strand A' 518..523 CDD:409353 0/4 (0%)
Ig strand B 526..534 CDD:409353 3/7 (43%)
Ig strand C 543..547 CDD:409353 0/3 (0%)
Ig strand D 568..571 CDD:409353 1/5 (20%)
Ig strand E 572..576 CDD:409353 2/6 (33%)
Ig strand F 585..592 CDD:409353 3/6 (50%)
Ig strand G 599..603 CDD:409353 1/3 (33%)
FN3 620..707 CDD:238020 31/90 (34%)
FN3 728..802 CDD:238020 20/74 (27%)
Cell attachment site. /evidence=ECO:0000255 796..798 0/1 (0%)
FN3 817..909 CDD:238020 35/96 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 895..921 9/25 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I9086
eggNOG 1 0.900 - - E1_KOG3513
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 503 1.000 Inparanoid score I1297
OMA 1 1.010 - - QHG46028
OrthoDB 1 1.010 - - D292460at33208
OrthoFinder 1 1.000 - - FOG0000550
OrthoInspector 1 1.000 - - otm45829
orthoMCL 1 0.900 - - OOG6_100978
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X342
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.740

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