DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cont and Cntn3

DIOPT Version :10

Sequence 1:NP_649461.2 Gene:Cont / 40553 FlyBaseID:FBgn0037240 Length:1390 Species:Drosophila melanogaster
Sequence 2:NP_032805.2 Gene:Cntn3 / 18488 MGIID:99534 Length:1028 Species:Mus musculus


Alignment Length:1015 Identity:324/1015 - (31%)
Similarity:484/1015 - (47%) Gaps:72/1015 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   356 ERIPRGPYFVKQPNDTTFDVNKNRLINDVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQ 420
            |.:.:||.|:|:|:::.|.|:...  ..:||:|.|.|.|:|.|.|        :|....||....
Mouse    20 ELLLQGPVFIKEPSNSIFPVDSED--KKITLNCEARGNPSPHYRW--------QLNGSDIDTSLD 74

  Fly   421 DRYTISGGNLIIYEPKQALDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNLK-RSAETSEMNWG 484
            .||.::|||||:..|.:..|.|:|.|.|.|..|.|.|..|.|.|.::..|..: ||..:.....|
Mouse    75 HRYKLNGGNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTRMRSTVSVREGQG 139

  Fly   485 KSIFCDPPQHYPDVRYYWARDYFPNFVEEDQRVFVSRD-GALYFSFIETVDRANYSCTVQTLVSD 548
            ..:.|.||.|..::.|.|..:.:|:|||||.|.|||:: |.||.:.:|..|..||:|.|.:.|::
Mouse   140 VVLLCGPPPHSGELSYAWVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTN 204

  Fly   549 TGRNGPFFPLRVTPNSNYQALIFANTFPKV---FPEA-PVA-GDEIRLECMAFGYPIPSYNWTR- 607
            |...|...||.:..:.     :.....||:   |||. |.| |..:||||.|.|.|:|..||.| 
Mouse   205 TRVLGSPTPLVLRSDG-----VMGEYEPKIEVQFPETLPAAKGSTVRLECFALGNPVPQINWRRS 264

  Fly   608 QGLPLQRNAYTINYGRVLIIQNATTNDNGEYSCTITNPRKTLMKSIYINIQMRPQFTIPLKDMIK 672
            .|:|.........:..:|.|||....|.|.|.|...|.|...:....:....:|.:...|:|:..
Mouse   265 DGMPFPNKIKLRKFNGMLEIQNFQQEDTGSYECIAENSRGKNVARGRLTYYAKPYWLQLLRDVEI 329

  Fly   673 DYNSDVTFICEAFAIPDANYTWYKNAERLDPANINRDRYIIQDNVLTIKFLEKDKDDAMYQCGAQ 737
            .....:.:.|.|...|..:|.|.||.:.|    :..:|..|::..|||..|.. .|..|:||.|:
Mouse   330 AVEDSLYWECRASGKPKPSYRWLKNGDAL----VLEERIQIENGALTITNLNV-TDSGMFQCIAE 389

  Fly   738 NQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGSGG 802
            |:....:|||:|:|::..|.|.::|::..|.........:.|.|.|:||....|||...::....
Mouse   390 NKHGLIYSSAELKVVASAPDFSRNPMKKMVQVQVGSLVILDCKPRASPRALSFWKKGDMMVREQA 454

  Fly   803 HRRILPSGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHDLIF 867
            ....|..|.|.|...::.|.|.|||.|.||.|.......::|.:..|.|..|....|:....:| 
Mouse   455 RVSFLNDGGLKIMNVTKADAGTYTCTAENQFGKANGTTHLVVTEPTRIILAPSNMDVAVGESVI- 518

  Fly   868 LHCEAAFDELLDIAYVWKHNGEVLKNNHDGT------GRIIVDWNRLTVHNTSMRDAGDYECVVK 926
            |.|:...|.||||.:.|..||.:.....||:      |....|   |.:.|..::.:|.|.|:|:
Mouse   519 LPCQVQHDPLLDIMFAWYFNGALTDFKKDGSHFEKVGGSSSGD---LMIRNIQLKHSGKYVCMVQ 580

  Fly   927 SAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVDGSHNGRAIRYYNILGRTNWNRTWVN 991
            :.|:.:||...:.:.|:||.|..|:|.:|:.|.|.:.|.:|:.:...:..|.:..||.::..|.:
Mouse   581 TGVDSVSSAAELIVRGSPGPPENVKVDEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQS 645

  Fly   992 VSTHVQAREVDRYTSRQQAEVVNLTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIAPRN 1056
            |.|..:..:...:|    |.||.|.||..|||.:.|.|.:|.|.||.||....|.|..|.|||..
Mouse   646 VRTVPEVIDGKTHT----ATVVELNPWVEYEFRIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSE 706

  Fly  1057 VGGGGGKIGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEIKKQDHMGVAVVN---IPL 1118
            |.||||...:|.|||||:..:.|:..|..|.|.::..|...|....:...|:......|   :| 
Mouse   707 VSGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTSPDNPRYVFRNESIVP- 770

  Fly  1119 NNYYTEYEVKVQAINSVGKGPESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMSREN 1183
               ::.|||||...|:.|:||.|.:..:.|||:.|.|||....|.:.:|:...|:|..|.....|
Mouse   771 ---FSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKLSN 832

  Fly  1184 IRGKLIGHRLKYWKTTHQEEDSVYYLSRTTRNWALIVGLQPDTYYFVKVMAYNAAGEGPESERFE 1248
              |.|:|:.::||....:||.|........:..|::.||:.:..|:..|.|||:||.||.|....
Mouse   833 --GHLLGYEVRYWNNGGEEESSRKVKVAGNQTSAVLRGLKSNLAYYTAVRAYNSAGAGPFSATVN 895

  Fly  1249 ERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPVEGYKVRIWESDQNMITANNT---- 1309
            ..|.:..|.:||.:| |:....:.|.:.|..|...::|..|.||||....|.||.:...||    
Mouse   896 ATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVHVLNTNKTS 959

  Fly  1310 ---IVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMS 1346
               ::||   .|.||          :.|.|.::||||..|
Mouse   960 AELLLPI---KEDYI----------IEVKATTDGGDGTSS 986

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ContNP_649461.2 CLECT 139..>223 CDD:214480
Ig 361..466 CDD:472250 39/104 (38%)
Ig strand B 384..388 CDD:409356 2/3 (67%)
Ig strand C 397..409 CDD:409356 2/11 (18%)
Ig strand E 428..432 CDD:409356 3/3 (100%)
Ig strand F 443..448 CDD:409356 2/4 (50%)
Ig strand G 457..460 CDD:409356 1/2 (50%)
Ig 474..559 CDD:472250 32/85 (38%)
Ig strand B 485..489 CDD:409392 0/3 (0%)
Ig strand C 499..503 CDD:409392 1/3 (33%)
Ig strand E 523..527 CDD:409392 2/3 (67%)
Ig strand F 537..542 CDD:409392 3/4 (75%)
Ig strand G 553..556 CDD:409392 1/2 (50%)
Ig_3 584..644 CDD:464046 23/61 (38%)
Ig_3 660..738 CDD:464046 22/77 (29%)
Ig 756..844 CDD:472250 25/87 (29%)
Ig strand B 775..779 CDD:409358 0/3 (0%)
Ig strand C 788..792 CDD:409358 0/3 (0%)
Ig strand E 810..814 CDD:409358 2/3 (67%)
Ig strand F 824..829 CDD:409358 3/4 (75%)
Ig strand G 837..840 CDD:409358 0/2 (0%)
Ig <868..944 CDD:472250 24/81 (30%)
Ig strand C 881..885 CDD:409359 0/3 (0%)
Ig strand E 906..910 CDD:409359 1/3 (33%)
Ig strand F 920..925 CDD:409359 2/4 (50%)
Ig strand G 933..936 CDD:409359 2/2 (100%)
FN3 944..1043 CDD:238020 34/98 (35%)
FN3 1053..1146 CDD:238020 32/95 (34%)
fn3 1156..1244 CDD:394996 28/87 (32%)
fn3 1259..1346 CDD:394996 29/93 (31%)
Cntn3NP_032805.2 Ig 25..120 CDD:472250 39/104 (38%)
Ig strand B 46..50 CDD:409353 2/3 (67%)
Ig strand C 59..63 CDD:409353 2/11 (18%)
Ig strand E 82..86 CDD:409353 3/3 (100%)
Ig strand F 97..102 CDD:409353 2/4 (50%)
Ig strand G 111..114 CDD:409353 1/2 (50%)
Ig 129..214 CDD:472250 31/84 (37%)
Ig strand B 140..144 CDD:409353 0/3 (0%)
Ig strand C 154..158 CDD:409353 1/3 (33%)
Ig strand E 179..183 CDD:409353 2/3 (67%)
Ig strand F 193..198 CDD:409353 3/4 (75%)
Ig strand G 209..212 CDD:409353 1/2 (50%)
Ig 227..315 CDD:472250 31/87 (36%)
Ig strand B 245..249 CDD:409353 2/3 (67%)
Ig strand C 258..262 CDD:409353 1/3 (33%)
Ig strand E 280..284 CDD:409353 1/3 (33%)
Ig strand F 294..299 CDD:409353 2/4 (50%)
Ig strand G 307..310 CDD:409353 0/2 (0%)
Ig 320..403 CDD:472250 26/87 (30%)
Ig strand B 335..339 CDD:409353 0/3 (0%)
Ig strand C 348..352 CDD:409353 1/3 (33%)
Ig strand E 369..373 CDD:409353 1/3 (33%)
Ig strand F 383..388 CDD:409353 3/4 (75%)
Ig strand G 396..399 CDD:409353 1/2 (50%)
Ig 408..496 CDD:472250 25/87 (29%)
Ig strand B 427..431 CDD:409353 0/3 (0%)
Ig strand C 440..444 CDD:409353 0/3 (0%)
Ig strand E 462..466 CDD:409353 2/3 (67%)
Ig strand F 476..481 CDD:409353 3/4 (75%)
Ig strand G 489..492 CDD:409353 0/2 (0%)
Ig 498..598 CDD:472250 29/103 (28%)
Ig strand B 517..521 CDD:409353 2/4 (50%)
Ig strand C 532..536 CDD:409353 0/3 (0%)
Ig strand E 560..564 CDD:409353 2/6 (33%)
Ig strand F 574..579 CDD:409353 2/4 (50%)
FN3 579..>1006 CDD:442628 141/432 (33%)
Ig strand G 587..590 CDD:409353 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 684..714 16/29 (55%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.