DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cont and rig-6

DIOPT Version :9

Sequence 1:NP_649461.2 Gene:Cont / 40553 FlyBaseID:FBgn0037240 Length:1390 Species:Drosophila melanogaster
Sequence 2:NP_001022014.1 Gene:rig-6 / 173828 WormBaseID:WBGene00016354 Length:1196 Species:Caenorhabditis elegans


Alignment Length:1390 Identity:313/1390 - (22%)
Similarity:526/1390 - (37%) Gaps:351/1390 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 DAYTDEDNFCPEHWVSFRQTCYRFIRSPKRNWAEAKKICKAHNADLINVDNVEKHSFILKNLILQ 194
            :|..||.: ||..|......|.|.:.:| .|...:||.|.....:|                   
 Worm    18 NALIDEAS-CPIGWQIASDQCVRIVIAP-ANLKHSKKYCHHEGGEL------------------- 61

  Fly   195 NQRQNRFFISARQTGPLNWVNDDNTQLVQIEDSFSMDEQVPLENEDLHDNRFLVQNDLNNQNINN 259
                                               ||..|.|..||:.|   |::| |:...::.
 Worm    62 -----------------------------------MDTSVTLLLEDVMD---LLKN-LHENGLSE 87

  Fly   260 PNQFYNSLPGTVNQRNQNNLRGF-IGPNQPYGDNRYVRDRVVYAFSKKRDRWMFMPAYEIELNLF 323
            |......:...:|:....|.:.. |.|:..:.                                |
 Worm    88 PTFHVGGMGQALNRTEDGNYKIITINPSSHFP--------------------------------F 120

  Fly   324 ICESKVLYSSDNVNIKLDDKRPYHYGLDINDMER---------IPRGPYFVKQPNDTTFDVNKNR 379
            ||                         .:|.|.|         :|.|...:.....:....:...
 Worm   121 IC-------------------------SLNKMARRSLLFQQKLLPVGAPQISLTGQSEIYFHPRH 160

  Fly   380 LINDVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDP-LAQDRYTISGGNLIIYEPKQALDQGA 443
            ..:.:.|.|...|.|.|:..||:.       :.:.:.| ::...|.:|||||:: .....|...:
 Worm   161 DADYIALPCTVQGNPKPTVAWYKN-------DVEVLSPSMSNVSYLLSGGNLLV-PASSTLAYSS 217

  Fly   444 YHCVAENKFGRIRSESAHLNFGFIMEFNLKRSAETSEMNWGKSIFCDPPQHYP-DVRYYW----A 503
            :||.|.|..|.:||....|...||..|...|....|....|..:.||.|.|.| .:.|.|    :
 Worm   218 FHCTARNSLGEVRSPPILLKPSFIDPFRPHRLDVYSLATGGAKLDCDAPAHQPKSLTYSWLYGSS 282

  Fly   504 RDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCTVQTLVSDTGRNGPFFPL-RVTP---NS 564
            .|   ..:.:::|.|:|.||.|:||::...|..:|:|::....:.:|..||||.| ..||   ||
 Worm   283 TD---RILSQNERKFISLDGTLFFSYVTAEDEDSYACSLSVYSTQSGHYGPFFRLISSTPKLVNS 344

  Fly   565 NYQALIFANTFPKVFPEAPVAGDEIRLECMAFGYPIPSYNWTR-QGLPLQRNAYTINYGRVLIIQ 628
            .:...: .:|.|::|||.|..||.|.|||.|:..|:|.|.|:| .|.|:...::..||||||.|:
 Worm   345 TFPPKL-DSTQPQIFPEDPKVGDSIYLECFAYASPLPQYKWSRVDGKPIPARSHISNYGRVLKIE 408

  Fly   629 NATTNDNGEYSCTITNPRKTLMKSIYINIQMRPQFTIPLKDMIKDYNSDVTFIC-----EAFAIP 688
            .....|.|:|.|...|...:....:::.::..|.....|.|.:....|:|:|.|     :::   
 Worm   409 KVNYGDAGKYKCVAMNAFGSAAGEVHVKLRAPPSILQGLHDRLVPTESNVSFECLLSNADSY--- 470

  Fly   689 DANYTWYKNAERLDPANI---NRDRYIIQDNVLTIKFLEKDKDDAMYQCGAQNQLKTSFSSAQLR 750
             ::..|:|:|:.:.|..:   .|.|..|..|||.:||.: :.|..:|||.|.|.:.:|.|||.|.
 Worm   471 -SSVEWFKDAKPIVPLLLPAEKRKRLKIDHNVLHLKFAD-ETDSGVYQCVASNDVGSSSSSALLT 533

  Fly   751 VLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGSGGHRRILP------- 808
            |....|.|..:.:..:|:|.:....:|.|..||:||...:|      ..:||.:  ||       
 Worm   534 VKDSAPVFPPNAMSRKVFAAFGSTVSIPCIFEASPRFHGKW------ADAGGSK--LPQKGRIRD 590

  Fly   809 -SGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHDLIFLHCEA 872
             .|.::|.....:|.|::.|.|.|:.|  ::||:|    ::..:..|..:....:.:.:.:.||.
 Worm   591 EEGVISIEKVLHEDAGLFFCTAHNKLG--KAHAQV----QLIVVNKPSIKTNFLDEETVNMSCEV 649

  Fly   873 AFD-----ELLDIAYVWK----------------------HNGEVLKNNHDGTGRIIVDWNRLTV 910
            ...     |..:..:.||                      |.|..||...|           |.|
 Worm   650 ELTCENSAECPEALFEWKINDRPAKEYPSLKSKVHEKKSGHKGRHLKQKVD-----------LEV 703

  Fly   911 HNT--SMRDAGDYEC----------VVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAI-- 961
            ..:  ..|..|.:.|          |.|.   ::.|..::::|         |:.:..|.|.:  
 Worm   704 PKSLAGSRQIGRFACSSLYGGSSEFVTKP---QLPSPIALTVE---------QMDEDGKKKKMFR 756

  Fly   962 IEW------VDGSHNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVNLTPWSA 1020
            :.|      .|...:...:..|.:..||..||.|     ....|::.....:....|.||.|.:.
 Worm   757 LRWRLPPQHRDTRDHSPKVEGYLVELRTRKNRKW-----RAAERQLVGNMEKDSITVENLLPNTE 816

  Fly  1021 YEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIAPRNVGGGGGKIGDLTITWDPL-LPQEQHSHGI 1084
            |:|.|.:|....||.||.||....|....|.....|:.........|.:.|.|: :.||.....:
 Worm   817 YQFRVRSVESAAIGEPSIPSDWVKTAPGAPSETIDNLKWRSLDSQTLLVEWQPIEIGQESSGDNL 881

  Fly  1085 HYKVFWKLKGAIEWASDEIK--KQD-----HMG----VAVVNIPLNNYYTEYEVKVQAINSVGKG 1138
            .|:|.|......:.|:|::|  .||     |:.    .|::.:..........:.|:.:|..|.|
 Worm   882 RYRVSWSEATVGKNATDDMKLSNQDDDFENHLDSDQPQAILKLNTTEGCRMVVLAVRPVNDQGNG 946

  Fly  1139 P--ESEIAVIHSAEDMPQVAPQ--KPIALAYNSTCFNVTW-----------QPIDMSRENIRGKL 1188
            .  ...||.::|..::.:|:..  |||    |::..|::|           ..:.::..|:.|..
 Worm   947 SVGTDTIAFLNSHGELKKVSLHNVKPI----NASHVNISWTWDNTSDCDTKHAVQITCINLSGSE 1007

  Fly  1189 IGHRLKYWKTTHQEEDSVYYLSRTTRNWALIVGLQPDTYYFVKVMAYNAAGE-GPESERFEERTY 1252
            |...:        ..|.:::         ::.||:.:|.|...:.|.:..|. ||.|::|...| 
 Worm  1008 ISATV--------ASDRIFW---------MLGGLEAETAYDCDLKAIDNHGSFGPASKKFRIHT- 1054

  Fly  1253 RKAPQKPPSSVHVYG-------INPSTVRVVWRYV---SPSQDEEPVEGYKVRIWESDQNMITAN 1307
               .|.|||...:.|       .:..|..:.|..:   .|::.|... |||:.|:.|:    ||.
 Worm  1055 ---KQHPPSETPLIGKLMMKQMKDTYTTILEWSSIELQKPNRTENGC-GYKIFIYISE----TAT 1111

  Fly  1308 NTI---VPIGQKL------ESYINNLTPGKSYNMRVLAYSNGGDGRMSSPTLHFQMGKTTRNGAN 1363
            ..|   :|: |:|      .:.::.|.....|.::|..|:.||.|.:|.|       ::.|.|:.
 Worm  1112 EAIELDMPL-QRLSDRRNPSARLDGLKLMYMYTIKVAGYNPGGIGPISEP-------RSIRLGSP 1168

  Fly  1364 TRHGHNINT------ALILSTLLLI 1382
            ....:...:      :|:|..|||:
 Worm  1169 GTMDYTTGSSDVPIPSLLLLLLLLL 1193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ContNP_649461.2 CLECT 139..>223 CDD:214480 11/83 (13%)
Ig 361..460 CDD:299845 23/99 (23%)
I-set 362..462 CDD:254352 22/100 (22%)
Ig 466..559 CDD:299845 31/98 (32%)
IG_like 584..657 CDD:214653 26/73 (36%)
IGc2 586..645 CDD:197706 25/59 (42%)
Ig 667..751 CDD:299845 29/91 (32%)
IG_like 676..751 CDD:214653 27/82 (33%)
IG_like 765..844 CDD:214653 24/86 (28%)
Ig 773..844 CDD:299845 22/78 (28%)
I-set 851..940 CDD:254352 19/127 (15%)
Ig 866..944 CDD:299845 19/116 (16%)
FN3 944..1043 CDD:238020 26/106 (25%)
FN3 1053..1146 CDD:238020 22/106 (21%)
fn3 1156..1244 CDD:278470 18/101 (18%)
fn3 1259..1346 CDD:278470 26/105 (25%)
rig-6NP_001022014.1 Ig 153..237 CDD:299845 22/91 (24%)
Ig 240..335 CDD:299845 30/97 (31%)
Ig 358..427 CDD:299845 30/68 (44%)
IG_like 363..436 CDD:214653 26/72 (36%)
I-set 441..534 CDD:254352 30/97 (31%)
IGc2 456..524 CDD:197706 22/72 (31%)
I-set 547..627 CDD:254352 24/93 (26%)
Ig 552..627 CDD:299845 23/88 (26%)
FN3 737..839 CDD:238020 27/115 (23%)
fn3 970..1047 CDD:278470 18/97 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I7124
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 263 1.000 Inparanoid score I1891
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46028
OrthoDB 1 1.010 - - D292460at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto17294
orthoMCL 1 0.900 - - OOG6_100978
Panther 1 1.100 - - O PTHR10075
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3370
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1010.010

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