DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cont and Cntn1

DIOPT Version :9

Sequence 1:NP_649461.2 Gene:Cont / 40553 FlyBaseID:FBgn0037240 Length:1390 Species:Drosophila melanogaster
Sequence 2:NP_001153119.1 Gene:Cntn1 / 12805 MGIID:105980 Length:1020 Species:Mus musculus


Alignment Length:1082 Identity:334/1082 - (30%)
Similarity:510/1082 - (47%) Gaps:123/1082 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 RPYHYGLDINDMERIPRGPYFVKQPNDTTFDVNKNRLINDVTLSCLANGYPTPSYTWYREVYVDD 408
            |.|.:|:...|.   ..||.|.:||.:|.:.  :..|...|:|:|.|...|.|.|.|        
Mouse    26 RRYGHGVSEEDK---GFGPIFEEQPINTIYP--EESLEGKVSLNCRARASPFPVYKW-------- 77

  Fly   409 RLEYQKIDPLAQDRYTISGGNLIIYEPKQALDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNLK 473
            |:....:| |..|||::.||||:|..|.:..|.|.|:|:|.|.:|.:||..|.|:||::..|..:
Mouse    78 RMNNGDVD-LTNDRYSMVGGNLVINNPDKQKDAGVYYCLASNNYGMVRSTEATLSFGYLDPFPPE 141

  Fly   474 RSAETSEMNWGKS--IFCDPPQHYP-DVRYYWARDYFPNFVEEDQRVFVSR-DGALYFSFIETVD 534
            ...|. ::..||.  :.||||.|:| |:.|.|..:.||.|:..|:|.|||: :|.||.:.:|:.|
Mouse   142 ERPEV-KVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSD 205

  Fly   535 RANYSCTVQTLVSDTGRNGPFFPLRVTPNSN---YQALIFANTFPKVFPEAPVAGDEIRLECMAF 596
            |.||||.|.:..........|.||...|...   |.|.|... |..::   .:.|..:.|||.|.
Mouse   206 RGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQ-FKDIY---TMMGQNVTLECFAL 266

  Fly   597 GYPIPSYNWTRQGLPLQRNAYTINYGRVLIIQNATTNDNGEYSCTITNPRKTLMKSIYINIQMRP 661
            |.|:|...|.:...|:...|.....|.||.|.|....|.|.|.|...|.|........|.:|..|
Mouse   267 GNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQAFP 331

  Fly   662 QFTIPLKDMIKDYNSDVTFICEAFAIPDANYTWYKNAERLDPANINRDRYIIQDNVLTIKFLEKD 726
            ::...:.|...|..||:.:.|.|...|.....|.||........:         .:..:.|    
Mouse   332 EWVEHINDTEVDIGSDLYWPCIATGKPIPTIRWLKNGYSYHKGEL---------RLYDVTF---- 383

  Fly   727 KDDAMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKFQW 791
            ::..||||.|:|...:.:::|:|::|::.|:|:.:|::.::.|...|...|.|.|:|||:|||.|
Mouse   384 ENAGMYQCIAENAYGSIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSW 448

  Fly   792 KKDGQVIGSGGHRRILPSGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIRFIETPPQ 856
            .|..:.:.:.....|...|:|.|:..:|:|.|||||.|.|..|...|...:::....|.|..|..
Mouse   449 SKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPIN 513

  Fly   857 RIVSKEHDLIFLHCEAAFDELLDIAYVWKHNGEVLKNNHDGT-----GRIIVDWN-RLTVHNTSM 915
            ..::...:.. :.|.|:||..||:.:||..||.|:..|.:.|     ...::|.| .|.:.|..:
Mouse   514 ADITVGENAT-MQCAASFDPALDLTFVWSFNGYVIDFNKEITHIHYQRNFMLDANGELLIRNAQL 577

  Fly   916 RDAGDYECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVDGSHNGRAIRYYNIL 980
            :.||.|.|..::.|:..|:...:.:.|.||.|||:::..|..|...:.|..||.|...|..|.|.
Mouse   578 KHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQ 642

  Fly   981 GRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVNLTPWSAYEFSVTAVNDLGIGTPSAPSPIYST 1045
            .:|..:..|.:..|.....|    .:.:.|:.|:|.||..|||.|.|.|.||.|.||.||....|
Mouse   643 TKTILSDDWKDAKTDPPIIE----GNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKT 703

  Fly  1046 YEDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEIKKQDHMG 1110
            ....|.:||.:||||||...:|||||.||..:..:.:...|.|.:|.....||     ||     
Mouse   704 DGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEW-----KK----- 758

  Fly  1111 VAVVNIPLNNYY---------TEYEVKVQAINSVGKGPESEIAVIHSAEDMPQVAPQKPIALAYN 1166
            |.|.|.....|.         |.::|||:|.|:.|.||.|.:|||:||:|.|..||.:......:
Mouse   759 VTVTNPDTGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLS 823

  Fly  1167 STCFNVTWQPIDMSRENIRGKLI-GHRLKYWKTTHQEEDSVYYLSRTTRNW-ALIVGLQPDTYYF 1229
            |:..:|.|       :::..|:: .::::|| ..|.:|.:.:.:..|::.: |.:..|.|||.||
Mouse   824 SSEISVHW-------KHVLEKIVESYQIRYW-AGHDKEAAAHRVQVTSQEYSARLENLLPDTQYF 880

  Fly  1230 VKVMAYNAAGEGPESERFEERTYRKAPQKPPSSVHVYGINPSTVR------VVWRYVSPSQDEEP 1288
            ::|.|.|:||.||.|:..|..|.:..|.:||..:       |:||      :.|.:|....:|..
Mouse   881 IEVGACNSAGCGPSSDVIETFTRKAPPSQPPRII-------SSVRSGSRYIITWDHVVALSNEST 938

  Fly  1289 VEGYKVRIWESDQN----MITANNTI-VPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMSSP 1348
            |.|||:......|:    ..|..::| |||.:..|           |.:.|.|:|:||||.:|..
Mouse   939 VTGYKILYRPDGQHDGKLFSTHKHSIEVPIPRDGE-----------YVVEVRAHSDGGDGVVSQV 992

  Fly  1349 TLHFQMGKTTRNGANTRHGHNINTALILSTLLLISTFLYTSQ 1390
            .:         :|.:|.      ::.:||.||....||..|:
Mouse   993 KI---------SGVSTL------SSSLLSLLLPSLGFLVYSE 1019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ContNP_649461.2 CLECT 139..>223 CDD:214480
Ig 361..460 CDD:299845 36/98 (37%)
I-set 362..462 CDD:254352 36/99 (36%)
Ig 466..559 CDD:299845 34/96 (35%)
IG_like 584..657 CDD:214653 23/72 (32%)
IGc2 586..645 CDD:197706 20/58 (34%)
Ig 667..751 CDD:299845 19/83 (23%)
IG_like 676..751 CDD:214653 17/74 (23%)
IG_like 765..844 CDD:214653 28/78 (36%)
Ig 773..844 CDD:299845 27/70 (39%)
I-set 851..940 CDD:254352 25/94 (27%)
Ig 866..944 CDD:299845 24/83 (29%)
FN3 944..1043 CDD:238020 36/98 (37%)
FN3 1053..1146 CDD:238020 37/101 (37%)
fn3 1156..1244 CDD:278470 25/89 (28%)
fn3 1259..1346 CDD:278470 27/97 (28%)
Cntn1NP_001153119.1 IgI_1_Contactin-1 40..134 CDD:409436 39/104 (38%)
Ig strand B 61..65 CDD:409436 2/3 (67%)
Ig strand C 74..78 CDD:409436 2/11 (18%)
Ig strand E 96..100 CDD:409436 3/3 (100%)
Ig strand F 111..116 CDD:409436 2/4 (50%)
Ig strand G 125..128 CDD:409436 1/2 (50%)
Ig2_Contactin-2-like 142..230 CDD:409392 33/88 (38%)
Ig strand B 154..158 CDD:409392 0/3 (0%)
Ig strand C 169..173 CDD:409392 1/3 (33%)
Ig strand E 194..198 CDD:409392 2/3 (67%)
Ig strand F 208..213 CDD:409392 4/4 (100%)
Ig strand G 224..227 CDD:409392 0/2 (0%)
IgI_3_Contactin-1 241..328 CDD:143259 26/90 (29%)
Ig strand B 259..263 CDD:143259 1/3 (33%)
Ig strand C 272..276 CDD:143259 0/3 (0%)
Ig strand E 293..297 CDD:143259 2/3 (67%)
Ig strand F 307..312 CDD:143259 2/4 (50%)
Ig strand G 320..323 CDD:143259 0/2 (0%)
Ig 332..408 CDD:416386 19/88 (22%)
Ig strand A 332..335 CDD:409353 0/2 (0%)
Ig strand A' 339..343 CDD:409353 1/3 (33%)
Ig strand B 347..355 CDD:409353 2/7 (29%)
Ig strand C 361..366 CDD:409353 1/4 (25%)
Ig strand C' 368..371 CDD:409353 0/2 (0%)
Ig strand E 374..379 CDD:409353 0/13 (0%)
Ig strand F 388..395 CDD:409353 5/6 (83%)
Ig strand G 399..408 CDD:409353 2/8 (25%)
Ig5_Contactin-1 413..501 CDD:409438 31/87 (36%)
Ig strand B 432..436 CDD:409438 1/3 (33%)
Ig strand C 445..449 CDD:409438 2/3 (67%)
Ig strand E 467..471 CDD:409438 2/3 (67%)
Ig strand F 481..486 CDD:409438 4/4 (100%)
Ig strand G 494..497 CDD:409438 1/2 (50%)
Ig6_Contactin 503..603 CDD:409359 26/100 (26%)
Ig strand B 522..526 CDD:409359 0/4 (0%)
Ig strand C 537..541 CDD:409359 1/3 (33%)
Ig strand E 568..572 CDD:409359 1/3 (33%)
Ig strand F 582..587 CDD:409359 2/4 (50%)
Ig strand G 595..598 CDD:409359 1/2 (50%)
FN3 612..699 CDD:238020 30/90 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 695..719 10/23 (43%)
FN3 711..803 CDD:238020 37/101 (37%)
fn3 813..895 CDD:394996 25/89 (28%)
FN3 907..991 CDD:238020 28/101 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I9267
eggNOG 1 0.900 - - E1_KOG3513
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 495 1.000 Inparanoid score I1379
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46028
OrthoDB 1 1.010 - - D292460at33208
OrthoFinder 1 1.000 - - FOG0000550
OrthoInspector 1 1.000 - - otm43749
orthoMCL 1 0.900 - - OOG6_100978
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3370
SonicParanoid 1 1.000 - - X342
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.770

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