DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cont and Cntn5

DIOPT Version :10

Sequence 1:NP_649461.2 Gene:Cont / 40553 FlyBaseID:FBgn0037240 Length:1390 Species:Drosophila melanogaster
Sequence 2:NP_446198.1 Gene:Cntn5 / 114589 RGDID:621302 Length:1099 Species:Rattus norvegicus


Alignment Length:1079 Identity:331/1079 - (30%)
Similarity:501/1079 - (46%) Gaps:101/1079 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   346 YHYGLDINDMERIPRGPYFVKQPNDTTFDVNKNRLINDVTLSCLANGYPTPSYTWYRE-VYVDDR 409
            ||........|.:..||.||::|:|..|..:.:.  ..|.|:|...|.|:|:|.|.|. ..:|..
  Rat    83 YHSPDAFRQDESVDYGPVFVQEPDDIIFPTDSDE--KKVALNCEVRGNPSPTYRWLRNGTEIDLE 145

  Fly   410 LEYQKIDPLAQDRYTISGGNLIIYEPKQALDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNLK- 473
            .:|         ||::..|..||..|.::.|.|.|.|:|.|.||.|.|..|.|.|.::..|:.: 
  Rat   146 SDY---------RYSMIDGTFIINNPSESRDSGLYQCLATNTFGSILSREATLQFAYLGNFSGRT 201

  Fly   474 RSAETSEMNWGKSIFCDPPQHYPDVRYYWARDYFPNFVEEDQRVFVSRD-GALYFSFIETVDRAN 537
            |||.:.....|..:.|.||.|.|::.|.|..:.||:||.||.|.|:|:: |.||.|.::|.|..:
  Rat   202 RSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGS 266

  Fly   538 YSCTVQTLVSDTGRNGPFFPLRVTPNSNYQALIFANTFPKV---FPEAPVA--GDEIRLECMAFG 597
            |.|.|:..|::.....|..||.:..:.     :.....||:   ||....|  |..:::||.|.|
  Rat   267 YICLVKNAVTNARVLSPPTPLTLRNDG-----VMGEYEPKIEVHFPTTVTAAKGTTVKMECFALG 326

  Fly   598 YPIPSYNWTRQGLPLQRNAYTINYGR------VLIIQNATTNDNGEYSCTITNPRKTLMKSIYIN 656
            .|:|:..|      ::.|.|..:..|      ||.|.|...:|.|.|.||..|.|........:.
  Rat   327 NPVPTITW------MKVNGYIPSKSRLRKSQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQ 385

  Fly   657 IQMRPQFTIPLKDMIKDYNSDVTFICEAFAIPDANYTWYKNA------ERLDPANINRDRYIIQD 715
            |...|.:...|.|...|..|.:.:.|:|...|...|.|.||.      .|:|.||          
  Rat   386 IYTYPHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGAPLLPQSRVDTAN---------- 440

  Fly   716 NVLTIKFLEKDKDDAMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCD 780
            .||.|..:.: .|..||||.|:|:....::||:|::|:..|||:.:.::..:....:....|.|.
  Rat   441 GVLAIHSVNQ-SDAGMYQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIVTKDREVLIECK 504

  Fly   781 PEAAPRPKFQWKKDGQVIGSGGHRRILPSGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVL 845
            |:.:|:|...|:|..:.:.......|||.|:|.|...|:.|||.|.|...|..|:.|..|.|.|.
  Rat   505 PQGSPKPAISWRKGDKAVRGNKRIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASVSVK 569

  Fly   846 QEIRFIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHNGEVL----KNNHDGTGRIIVDWN 906
            :..| ||..|:|......:.|.|:|:|..|..||:.:.|...|:.:    :..|..:.|......
  Rat   570 EPTR-IELTPKRTELTVGESIVLNCKAMHDSSLDVTFYWTLKGQPIDFEKEGGHFESIRAQASSA 633

  Fly   907 RLTVHNTSMRDAGDYECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVDGSHNG 971
            .|.:.|..:..||.|.|.|::..:.:|.:..:.:.|.||.||.|.|.:|:::.|.:.|...:.|.
  Rat   634 DLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSWSPATDNH 698

  Fly   972 RAIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVNLTPWSAYEFSVTAVNDLGIGTP 1036
            ..|..||:..|:.::..|..|.|..:....|    .:.|..|:|.||..|||.|.|.|.:|.|.|
  Rat   699 SPISSYNLQARSPFSLGWQTVKTVPEVITGD----MESAMAVDLNPWVEYEFRVVATNPIGTGDP 759

  Fly  1037 SAPSPIYSTYEDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEW--- 1098
            |.||.:..|.|..|..||.||.||.|:..:|.|.|:|:..:.|:..|..|.|.::..|...|   
  Rat   760 SIPSRMIRTNEAVPKTAPSNVSGGSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWKEK 824

  Fly  1099 --ASDEIKKQDHMGVAVVNIPLNNYYTEYEVKVQAINSVGKGPESEIAVIHSAEDMPQVAPQKPI 1161
              .|.:..|..:...:|.  ||    |.:||||...|:.|.||.|:|.||.|||..|..||....
  Rat   825 MVTSSDASKFIYRDESVP--PL----TPFEVKVGVYNNKGDGPFSQIVVICSAEGEPTAAPTDVT 883

  Fly  1162 ALAYNSTCFNVTWQPIDMSRENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTRNWALIVGLQPDT 1226
            |.:.:.:...|.|:.:   :|:: |:..|..:.|||.|..|:.:....:|...::.::.||:.||
  Rat   884 ATSVSVSEIFVVWKHV---KESL-GRPQGFEIGYWKDTEPEDSAETVRTRGNESFVMLTGLEGDT 944

  Fly  1227 YYFVKVMAYNAAGEGPESERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPVEG 1291
            .|.:.|.|||.||.||.|......|.|..|.:||.::. :....|.|.:.|..|.|..:|..|.|
  Rat   945 LYHLTVRAYNGAGYGPPSREVSATTKRHPPSEPPGNLR-WEQQGSQVSLGWEPVRPLANESEVMG 1008

  Fly  1292 YKVRIWESDQNMITANNTIVPIGQKLESY----INNLTPGKSYNMRVLAYSNGGDGRMSS----P 1348
            |||...:...:.          ||.:|:.    :..|.....|.:.|.|||.||||..||    |
  Rat  1009 YKVFYRQEGHSK----------GQVIETQKPQAVVPLPEAGVYIIEVRAYSEGGDGTASSQIRVP 1063

  Fly  1349 TLHFQMGKTTRNGANTRHGHN--INTALILSTLLLISTF 1385
            :  :..||.| :..:|.|..:  .:..|:|:.:|..|::
  Rat  1064 S--YAGGKIT-SAQSTLHSLSKWSSVTLLLALMLPSSSW 1099

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ContNP_649461.2 CLECT 139..>223 CDD:214480
Ig 361..466 CDD:472250 37/105 (35%)
Ig strand B 384..388 CDD:409356 2/3 (67%)
Ig strand C 397..409 CDD:409356 4/12 (33%)
Ig strand E 428..432 CDD:409356 1/3 (33%)
Ig strand F 443..448 CDD:409356 2/4 (50%)
Ig strand G 457..460 CDD:409356 1/2 (50%)
Ig 474..559 CDD:472250 32/85 (38%)
Ig strand B 485..489 CDD:409392 0/3 (0%)
Ig strand C 499..503 CDD:409392 1/3 (33%)
Ig strand E 523..527 CDD:409392 2/3 (67%)
Ig strand F 537..542 CDD:409392 2/4 (50%)
Ig strand G 553..556 CDD:409392 1/2 (50%)
Ig_3 584..644 CDD:464046 21/67 (31%)
Ig_3 660..738 CDD:464046 25/83 (30%)
Ig 756..844 CDD:472250 27/87 (31%)
Ig strand B 775..779 CDD:409358 1/3 (33%)
Ig strand C 788..792 CDD:409358 0/3 (0%)
Ig strand E 810..814 CDD:409358 2/3 (67%)
Ig strand F 824..829 CDD:409358 2/4 (50%)
Ig strand G 837..840 CDD:409358 1/2 (50%)
Ig <868..944 CDD:472250 19/79 (24%)
Ig strand C 881..885 CDD:409359 0/3 (0%)
Ig strand E 906..910 CDD:409359 1/3 (33%)
Ig strand F 920..925 CDD:409359 2/4 (50%)
Ig strand G 933..936 CDD:409359 1/2 (50%)
FN3 944..1043 CDD:238020 35/98 (36%)
FN3 1053..1146 CDD:238020 33/97 (34%)
fn3 1156..1244 CDD:394996 27/87 (31%)
fn3 1259..1346 CDD:394996 26/90 (29%)
Cntn5NP_446198.1 Ig 98..193 CDD:472250 37/105 (35%)
Ig strand B 119..123 CDD:409353 2/3 (67%)
Ig strand C 132..136 CDD:409353 1/3 (33%)
Ig strand E 155..159 CDD:409353 1/3 (33%)
Ig strand F 170..175 CDD:409353 2/4 (50%)
Ig strand G 184..187 CDD:409353 1/2 (50%)
Ig 202..287 CDD:472250 31/84 (37%)
Ig strand B 213..217 CDD:409353 0/3 (0%)
Ig strand C 227..231 CDD:409353 1/3 (33%)
Ig strand E 252..256 CDD:409353 2/3 (67%)
Ig strand F 266..271 CDD:409353 2/4 (50%)
Ig strand G 282..285 CDD:409353 1/2 (50%)
Ig 300..387 CDD:472250 27/92 (29%)
Ig strand B 318..322 CDD:409353 0/3 (0%)
Ig strand C 331..335 CDD:409353 1/9 (11%)
Ig strand E 352..356 CDD:409353 2/3 (67%)
Ig strand F 366..371 CDD:409353 2/4 (50%)
Ig strand G 379..382 CDD:409353 0/2 (0%)
Ig 392..475 CDD:472250 28/93 (30%)
Ig strand B 407..411 CDD:143205 0/3 (0%)
Ig strand C 420..424 CDD:143205 1/3 (33%)
Ig strand E 441..445 CDD:143205 2/3 (67%)
Ig strand F 455..460 CDD:143205 4/4 (100%)
Ig strand G 468..471 CDD:143205 0/2 (0%)
Ig5_Contactin 480..568 CDD:409358 27/87 (31%)
Ig strand A 480..485 CDD:409358 3/4 (75%)
Ig strand A' 488..493 CDD:409358 0/4 (0%)
Ig strand B 497..504 CDD:409358 1/6 (17%)
Ig strand C 512..516 CDD:409358 0/3 (0%)
Ig strand D 530..533 CDD:409358 2/2 (100%)
Ig strand E 534..539 CDD:409358 2/4 (50%)
Ig strand F 547..555 CDD:409358 3/7 (43%)
Ig strand G 561..568 CDD:409358 3/6 (50%)
Ig 570..671 CDD:472250 25/101 (25%)
Ig strand B 589..593 CDD:409353 2/3 (67%)
Ig strand C 604..608 CDD:409353 0/3 (0%)
Ig strand E 633..637 CDD:409353 1/3 (33%)
Ig strand F 647..652 CDD:409353 2/4 (50%)
Ig strand G 660..663 CDD:409353 1/2 (50%)
FN3 667..>1060 CDD:442628 137/417 (33%)
FN3 671..768 CDD:238020 35/100 (35%)
FN3 878..969 CDD:238020 28/94 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 958..983 8/25 (32%)
Blue background indicates that the domain is not in the aligned region.

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