DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cont and cntn2

DIOPT Version :10

Sequence 1:NP_649461.2 Gene:Cont / 40553 FlyBaseID:FBgn0037240 Length:1390 Species:Drosophila melanogaster
Sequence 2:XP_031752703.1 Gene:cntn2 / 100487049 XenbaseID:XB-GENE-6070188 Length:1033 Species:Xenopus tropicalis


Alignment Length:1070 Identity:309/1070 - (28%)
Similarity:476/1070 - (44%) Gaps:113/1070 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 GPYFVKQPNDTTFDVNKNRLINDVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQDRYTI 425
            ||.|.:||.:|.|.  ...:...|||.|.|...|:.:|.|        :|...:::..|...|.:
 Frog    31 GPVFEEQPENTLFP--DGSIEEQVTLPCRARASPSATYRW--------QLNGTELNLTADPSYRL 85

  Fly   426 SGGNLIIYEPKQALDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNLKR--SAETSEMNWGKSIF 488
            .||||.|..|.|:...|.|.|:|.|..|.:.|..|.|.||::.||..::  :.:.:| .||..:.
 Frog    86 VGGNLAISGPTQSKHAGTYQCIASNPKGTVLSSEASLRFGYLQEFPAEQRDTVKVTE-GWGVMLA 149

  Fly   489 CDPPQHYPDVRYYWARDYFPNFVEEDQRVFVSR-DGALYFSFIETVDRANYSCTVQTLVSDTGRN 552
            |:||:|||.:.|.|..:.||.|:..|.|.|||: .|.||.:.....|...|||...:.:|.|.::
 Frog   150 CNPPKHYPGLSYRWLLNEFPTFLNTDNRRFVSQVTGNLYVAQTVKEDEGAYSCLTTSHISFTTKS 214

  Fly   553 --GPFFPLRVTPNSNYQALIFANTFPKVFPEAPVA--GDEIRLECMAFGYPIPSYNWTRQGLPLQ 613
              ..|..|.|  ||..:...:|.:....||....|  |..:.|||.|||.|:|...|.:....|.
 Frog   215 VYSSFTQLNV--NSEVKPRTYAPSIKVRFPGETYALYGQAVFLECFAFGNPVPHIRWRKVDGTLP 277

  Fly   614 RNAYTINYGRVLIIQNATTNDNGEYSCTITNPRKTLMKSIYINIQMRPQFTIPLKDMIKDYNSDV 678
            .....|:  .||...:.|..::|.|.|...|...:......:.:|.:|::...:.|......||:
 Frog   278 PRLLVID--PVLHFPSITFEEDGTYECEAVNSEGSTTHQGRVIVQAQPEWLHVITDTEAKIGSDL 340

  Fly   679 TFICEAFAIPDANYTWYKNAERLDPANINRDRYIIQDNV-LT---IKFLEKD-KDDAMYQCGAQN 738
            .:.|.|...|.....|.::.:.|          :.|.|: :|   |||.... .|..||||.|:|
 Frog   341 LWSCAASGKPRPTIRWLRDGKPL----------MTQVNIEITNGQIKFTSLSLHDSGMYQCVAEN 395

  Fly   739 QLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGSGGH 803
            :..|.:::|:|.|.::.|.|:..|::..:.|...|...|.|:|.|||.|...|.|..:::.:...
 Frog   396 KHGTIYTTAELTVQALAPDFRLSPVKRLIPAARGGEVIIQCNPRAAPTPLILWSKGTELLFNSSR 460

  Fly   804 RRILPSGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHDLIFL 868
            ..:..:|||.:...||.|||.|||.|.|..|...| ..|:.::|...|...|......:.|.|.|
 Frog   461 VTVTANGTLILRNISRSDEGKYTCFAENIMGKSNS-TGVLSVREATKITLAPSGSDINQGDSITL 524

  Fly   869 HCEAAFDELLDIAYVWKHNGEVLKNNHDGTGRIIVDWNR----------------LTVHNTSMRD 917
            .|.|:.|..:|:.:.|..||            |.:|:.:                |.:.|..:|.
 Frog   525 QCHASHDPSMDLTFTWTLNG------------IPIDFEKEAQNYRRTSMDEAVGDLHIINAQLRH 577

  Fly   918 AGDYECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVDGSHNGRAIRYYNILGR 982
            ||.|.|:.::.|:..|:..|:.|.|.||.||||.|..:.:|...:.|..|..|...|..|.:..|
 Frog   578 AGKYTCMAQTVVDRTSAMASLLIRGPPGPPGGVVVKYVGETMVQLSWSRGFDNHSPISRYVVQVR 642

  Fly   983 TNWNRTWVNVSTHVQAREVDRYTSRQQAEVVNLTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYE 1047
            ......|.:..|.....|    .:.:.|.||.|..|:.|.|.:.|.|.||.|.|||||.:..|.|
 Frog   643 EPLTEIWRSARTDPPTVE----GNAESALVVGLNQWTDYLFRIVASNILGDGDPSAPSALIRTRE 703

  Fly  1048 DKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEI---KKQDHM 1109
            ..|.:||..||||||...:|||.|.|:..|.|:.....|.:.:|.|....|.:..:   :.|.::
 Frog   704 AAPNVAPSEVGGGGGAPNELTINWTPIGRQYQNGDDFGYIIAFKRKNENTWLTVRVPGGQSQQYV 768

  Fly  1110 ----GVAVVNIPLNNYYTEYEVKVQAINSVGKGPESEIAVIHSAEDMPQVAPQKPIALAYNSTCF 1170
                .:|.        ||.::||:|..|..|:||.|....::|||:.|::.|.:..|.|.:|:..
 Frog   769 YRNESIAA--------YTPFDVKIQGYNKKGEGPFSRDTTVYSAEEEPRMFPSEVKATAISSSDI 825

  Fly  1171 NVTWQPIDMSRENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTRNWALIVGLQPDTYYFVKVMAY 1235
            .|.|.|:    :.::|.|:|:.::||||:.:|..:....|......|.:..|:|||.|:|.|..|
 Frog   826 EVAWNPV----QTLKGVLLGYEIRYWKTSDKEAAADRVRSAGMATTAHVTSLKPDTTYYVTVRVY 886

  Fly  1236 NAAGEGPESERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPVEGYKVRIWESD 1300
            |.||.||.|......|.:....|.|.::. :.::..::.:.|..|...|:|..|.|||:      
 Frog   887 NQAGTGPSSPATNVTTSKAPSSKLPENIK-WTLSRKSLSIKWNPVVALQNESSVTGYKI------ 944

  Fly  1301 QNMITANNTIVPIGQKLESYINNLT-------PG-KSYNMRVLAYSNGGDGRMSSPTLHFQMGKT 1357
              :...::...||     .|:.:.|       .| .:..:::.|...||||..:.  :|......
 Frog   945 --LYRMSHHSTPI-----LYVTSKTHIELPFPEGFSTVTIQLRATGKGGDGEPAE--VHIPTDSG 1000

  Fly  1358 TRNGANTRHGHNINTALILSTLLLISTFLY 1387
            |...........|...|...|..|:....|
 Frog  1001 TSMMVENSASRPITQTLAAKTTTLLFLIRY 1030

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ContNP_649461.2 CLECT 139..>223 CDD:214480
Ig 361..466 CDD:472250 35/104 (34%)
Ig strand B 384..388 CDD:409356 3/3 (100%)
Ig strand C 397..409 CDD:409356 2/11 (18%)
Ig strand E 428..432 CDD:409356 3/3 (100%)
Ig strand F 443..448 CDD:409356 2/4 (50%)
Ig strand G 457..460 CDD:409356 1/2 (50%)
Ig 474..559 CDD:472250 29/89 (33%)
Ig strand B 485..489 CDD:409392 0/3 (0%)
Ig strand C 499..503 CDD:409392 1/3 (33%)
Ig strand E 523..527 CDD:409392 2/3 (67%)
Ig strand F 537..542 CDD:409392 3/4 (75%)
Ig strand G 553..556 CDD:409392 0/2 (0%)
Ig_3 584..644 CDD:464046 19/61 (31%)
Ig_3 660..738 CDD:464046 21/82 (26%)
Ig 756..844 CDD:472250 30/87 (34%)
Ig strand B 775..779 CDD:409358 1/3 (33%)
Ig strand C 788..792 CDD:409358 0/3 (0%)
Ig strand E 810..814 CDD:409358 3/3 (100%)
Ig strand F 824..829 CDD:409358 3/4 (75%)
Ig strand G 837..840 CDD:409358 1/2 (50%)
Ig <868..944 CDD:472250 22/91 (24%)
Ig strand C 881..885 CDD:409359 0/3 (0%)
Ig strand E 906..910 CDD:409359 1/19 (5%)
Ig strand F 920..925 CDD:409359 2/4 (50%)
Ig strand G 933..936 CDD:409359 1/2 (50%)
FN3 944..1043 CDD:238020 34/98 (35%)
FN3 1053..1146 CDD:238020 31/99 (31%)
fn3 1156..1244 CDD:394996 30/87 (34%)
fn3 1259..1346 CDD:394996 19/94 (20%)
cntn2XP_031752703.1 Ig strand F 299..304 CDD:409357 2/4 (50%)
Ig strand G 312..315 CDD:409357 0/2 (0%)
Ig 324..408 CDD:472250 24/93 (26%)
Ig strand B 340..344 CDD:409353 0/3 (0%)
Ig strand C 353..357 CDD:409353 0/3 (0%)
Ig strand E 374..378 CDD:409353 1/3 (33%)
Ig strand F 388..393 CDD:409353 4/4 (100%)
Ig strand G 401..404 CDD:409353 0/2 (0%)
Ig5_Contactin 413..501 CDD:409358 30/88 (34%)
Ig strand A 413..418 CDD:409358 2/4 (50%)
Ig strand A' 421..426 CDD:409358 0/4 (0%)
Ig strand B 430..437 CDD:409358 2/6 (33%)
Ig strand C 445..449 CDD:409358 0/3 (0%)
Ig strand D 463..466 CDD:409358 0/2 (0%)
Ig strand E 467..472 CDD:409358 3/4 (75%)
Ig strand F 480..488 CDD:409358 5/7 (71%)
Ig strand G 494..501 CDD:409358 2/7 (29%)
Ig 503..601 CDD:472250 25/109 (23%)
Ig strand B 522..526 CDD:409440 2/3 (67%)
Ig strand C 537..541 CDD:409440 0/3 (0%)
Ig strand E 566..570 CDD:409440 1/3 (33%)
Ig strand F 580..585 CDD:409440 2/4 (50%)
Ig strand G 593..596 CDD:409440 1/2 (50%)
FN3 <632..1002 CDD:442628 114/401 (28%)
FN3 812..902 CDD:238020 31/93 (33%)
Ig 30..126 CDD:472250 35/104 (34%)
Ig strand B 52..56 CDD:409437 3/3 (100%)
Ig strand C 65..69 CDD:409437 2/11 (18%)
Ig strand E 88..92 CDD:409437 3/3 (100%)
Ig strand F 103..108 CDD:409437 2/4 (50%)
Ig strand G 117..120 CDD:409437 1/2 (50%)
Ig 134..223 CDD:472250 29/89 (33%)
Ig strand B 146..150 CDD:409392 0/3 (0%)
Ig strand C 160..164 CDD:409392 1/3 (33%)
Ig strand E 185..189 CDD:409392 2/3 (67%)
Ig strand F 199..204 CDD:409392 3/4 (75%)
Ig strand G 217..220 CDD:409392 0/2 (0%)
Ig 235..320 CDD:472250 22/86 (26%)
Ig strand B 253..257 CDD:409357 1/3 (33%)
Ig strand C 266..270 CDD:409357 0/3 (0%)
Ig strand E 285..289 CDD:409357 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.

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