DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cont and nrcam

DIOPT Version :9

Sequence 1:NP_649461.2 Gene:Cont / 40553 FlyBaseID:FBgn0037240 Length:1390 Species:Drosophila melanogaster
Sequence 2:XP_031753581.1 Gene:nrcam / 100216214 XenbaseID:XB-GENE-489769 Length:1325 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ContNP_649461.2 CLECT 139..>223 CDD:214480
Ig 361..460 CDD:299845
I-set 362..462 CDD:254352
Ig 466..559 CDD:299845
IG_like 584..657 CDD:214653
IGc2 586..645 CDD:197706
Ig 667..751 CDD:299845
IG_like 676..751 CDD:214653
IG_like 765..844 CDD:214653
Ig 773..844 CDD:299845
I-set 851..940 CDD:254352
Ig 866..944 CDD:299845
FN3 944..1043 CDD:238020
FN3 1053..1146 CDD:238020
fn3 1156..1244 CDD:278470
fn3 1259..1346 CDD:278470
nrcamXP_031753581.1 Ig 41..135 CDD:416386
Ig strand A 41..45 CDD:409353
Ig strand A' 50..54 CDD:409353
Ig strand B 59..66 CDD:409353
Ig strand C 72..77 CDD:409353
Ig strand C' 80..82 CDD:409353
Ig strand D 89..92 CDD:409353
Ig strand E 97..101 CDD:409353
Ig strand F 114..122 CDD:409353
Ig strand G 125..135 CDD:409353
Ig 156..246 CDD:416386
Ig strand A 156..159 CDD:409353
Ig strand A' 161..165 CDD:409353
Ig strand B 168..176 CDD:409353
Ig strand C 183..189 CDD:409353
Ig strand C' 192..195 CDD:409353
Ig strand D 201..205 CDD:409353
Ig strand E 207..211 CDD:409353
Ig strand F 222..230 CDD:409353
Ig strand G 233..246 CDD:409353
Ig 299..365 CDD:416386
Ig strand C 308..312 CDD:409353
Ig strand E 330..334 CDD:409353
Ig strand F 344..349 CDD:409353
Ig strand G 357..360 CDD:409353
Ig 369..457 CDD:416386
Ig strand B 385..389 CDD:409353
Ig strand C 398..402 CDD:409353
Ig strand E 422..426 CDD:409353
Ig strand F 436..441 CDD:409353
Ig strand G 449..452 CDD:409353
Ig strand A' 469..472 CDD:409353
IGc2 478..538 CDD:197706
Ig strand B 478..485 CDD:409353
Ig strand C 491..496 CDD:409353
Ig strand C' 498..500 CDD:409353
Ig strand D 507..511 CDD:409353
Ig strand E 514..519 CDD:409353
Ig strand F 527..535 CDD:409353
Ig 554..639 CDD:416386
Ig strand A 555..558 CDD:409353
Ig strand A' 560..564 CDD:409353
Ig strand B 567..576 CDD:409353
Ig strand C 584..589 CDD:409353
Ig strand C' 592..595 CDD:409353
Ig strand D 599..604 CDD:409353
Ig strand E 605..611 CDD:409353
Ig strand F 618..626 CDD:409353
Ig strand G 629..639 CDD:409353
FN3 653..743 CDD:238020
fn3 756..837 CDD:394996
FN3 854..953 CDD:238020
fn3 959..1043 CDD:394996
FN3 1090..1171 CDD:238020
Bravo_FIGEY 1212..1297 CDD:404722
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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