DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cont and cntn3a.2

DIOPT Version :9

Sequence 1:NP_649461.2 Gene:Cont / 40553 FlyBaseID:FBgn0037240 Length:1390 Species:Drosophila melanogaster
Sequence 2:XP_001340839.5 Gene:cntn3a.2 / 100000688 ZFINID:ZDB-GENE-090312-57 Length:1023 Species:Danio rerio


Alignment Length:1063 Identity:317/1063 - (29%)
Similarity:484/1063 - (45%) Gaps:116/1063 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 GPYFVKQPNDTTFDVNKNRLINDVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQDRYTI 425
            ||.:..:|:|.|.    ..|..:.||:|.|.|.|.|.|.|        .|....|:.....|..:
Zfish    28 GPKWRMEPSDLTV----GSLEEEATLACDAKGIPAPQYRW--------SLNGTLINLSTDSRRRL 80

  Fly   426 SGGNLIIYEPKQALDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNLK---RSAETSEMNWGKSI 487
            |||||:|....:|.|.|.|.|.|.|..|.|.|..|.|.|.::   |||   |||.:.....|..:
Zfish    81 SGGNLVIRSLDRAQDGGIYQCTAFNPHGAILSRRASLQFAYL---NLKTQTRSAVSVREGQGVVL 142

  Fly   488 FCDPPQHYPDVRYYWARDYFPNFVEEDQRVFVSRD-GALYFSFIETVDRANYSCTV-------QT 544
            .|..|.:..|:.:.|..:.:|.||::|.|.|||:: |.||.:.:|..|..||:|.|       :.
Zfish   143 LCGTPSYAGDLSFAWVFNEYPYFVQQDNRRFVSQETGNLYIAKVEPSDVGNYTCVVVNRITKGKV 207

  Fly   545 LVSDTGRNGPFFPLRVTPN---SNYQALIFANTFPKVFPEAPVAGDEIRLECMAFGYPIPSYNWT 606
            |.|.|       ||.:..:   ..|:..|..: |..:.|.|  .|..:.|||.|.|.|:|...|.
Zfish   208 LSSPT-------PLVLRTDGVMGEYEPKIEVH-FSDMVPAA--KGSVVTLECFALGNPVPEITWR 262

  Fly   607 R-QGLPLQRNAYTINYGRVLIIQNATTNDNGEYSCTITNPRKTLMKSIYINIQMRPQFTIPLKDM 670
            | ..:|........|...||.|.:....|.|.|.|...|..........::...:||:...::|:
Zfish   263 RANAVPFPSKVKMKNSNVVLEIPSFQQEDAGGYECVAENKMGKNTVQGRLSFHAKPQWVQTMRDI 327

  Fly   671 IKDYNSDVTFICEAFAIPDANYTWYKNAERLDPANINRDRYIIQDNVLTIKFLEKDKDDAMYQCG 735
            .......:.:.|:|...|..:|:|.||.|.|    ...||..|::..|||..:.. .|..||||.
Zfish   328 ALSIEERLFWECKANGKPKPSYSWLKNGELL----AAEDRIQIENGALTISSVNL-SDAGMYQCV 387

  Fly   736 AQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGS 800
            |:|:....:..|:|.||:..|.|.:.||.:.:.|......|:.|.|:|.|.....|:|..:|:..
Zfish   388 AENKHGIIYFGAELVVLASPPDFSRSPLRTLLKAKTGSTVTMECKPQAFPSAITLWRKGNEVMQR 452

  Fly   801 GGHRRILPSGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHDL 865
            ......||.|||.::..::.|.|.|.|:|.||.||..:..|::|        |.|.:|.....|:
Zfish   453 TDRITFLPDGTLRLTNVTKMDGGNYACLARNQFGTASTSGRLLV--------TDPTQITQGPMDM 509

  Fly   866 -------IFLHCEAAFDELLDIAYVWKHNGEVLKN-----NHDGTGRIIVDWNRLTVHNTSMRDA 918
                   |.|.|:.:.|..||:::.|..||::|..     .|.| |....|   |.:.|..::.|
Zfish   510 EIIVGESIVLPCQISCDPALDVSFSWAFNGQLLSKLDQHYEHVG-GSTSGD---LMIRNIQLKHA 570

  Fly   919 GDYECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVDGSHNGRAIRYYNILGRT 983
            |.|.|||.:.|..:|:...:.::|.||||.||.|.:|:.:.|.:.|..|..||..|..|.|..:|
Zfish   571 GKYVCVVDTDVESLSAAAILIVKGPPGAPDGVTVEEITDSTAQLSWRPGQDNGSPITSYIIQAKT 635

  Fly   984 NWNRTWVNVSTHVQAREVDRYTSRQQAEVVNLTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYED 1048
            .:...|..|:|..:..:.:..|    |.||:|..|..:||.|.|.|.:|:|.|| |:.:.:..||
Zfish   636 AFTVGWQAVNTVPEVIDGNTLT----ATVVDLNAWVEFEFRVLARNSVGVGEPS-PASLKTRTED 695

  Fly  1049 K-PYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEIKKQDHMGVA 1112
            . |..||.:||||||...:|.|||:|:....|:..|..|.:.::..|.:.|..           |
Zfish   696 AVPDTAPTDVGGGGGSKSELVITWEPVPEDLQNGDGFGYIIAFRPLGEVNWTH-----------A 749

  Fly  1113 VVNIPLNNYY----------TEYEVKVQAINSVGKGPESEIAVIHSAEDMPQVAPQKPIALAYNS 1167
            |.::|..:.|          :.:.|||.|.|:.|:||.|.:.::.|||:.|...|....|.:.::
Zfish   750 VTSVPTQSRYVYRNESILPFSPFSVKVGAYNTKGQGPFSPVTIVFSAENEPSGVPDGVWARSISA 814

  Fly  1168 TCFNVTWQPIDMSRENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTRNWALIVGLQPDTYYFVKV 1232
            |...|:|..:.:|.|    :::|:.:.||:...:.|..........::...|.||:..|.||:.|
Zfish   815 TEIEVSWHILSVSTE----RVLGYEVVYWEDDTKPETMGKVRVSANQDKVNISGLRGYTQYFLTV 875

  Fly  1233 MAYNAAGEGPESERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPVEGYKV--- 1294
            .|:|.||.||.|......|.:..|.:||.:|. :.:..|.:.|.|..|...:.|..|.||:|   
Zfish   876 SAFNTAGTGPLSPTINVTTKKSPPGQPPLNVE-WNLIGSKLTVHWEPVISLEMESDVTGYQVSYR 939

  Fly  1295 RIWESDQNMITANNTIVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMSSPTLHFQMGKTTR 1359
            |....:.|.||.|.|.|.:         .|.....|.:::.|.|:||:|..:.|....::..:.|
Zfish   940 RNRHKEINTITTNLTSVEL---------TLPADDDYVIQIRALSDGGEGMPTEPINIHKLSMSVR 995

  Fly  1360 NGANTRHGH---NINTALILSTL 1379
            .....|...   ::.:|:.||||
Zfish   996 GSRAWRPNTIPISLLSAIALSTL 1018

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ContNP_649461.2 CLECT 139..>223 CDD:214480
Ig 361..460 CDD:299845 34/98 (35%)
I-set 362..462 CDD:254352 34/99 (34%)
Ig 466..559 CDD:299845 32/103 (31%)
IG_like 584..657 CDD:214653 20/73 (27%)
IGc2 586..645 CDD:197706 19/59 (32%)
Ig 667..751 CDD:299845 25/83 (30%)
IG_like 676..751 CDD:214653 24/74 (32%)
IG_like 765..844 CDD:214653 24/78 (31%)
Ig 773..844 CDD:299845 23/70 (33%)
I-set 851..940 CDD:254352 28/100 (28%)
Ig 866..944 CDD:299845 25/82 (30%)
FN3 944..1043 CDD:238020 36/98 (37%)
FN3 1053..1146 CDD:238020 31/102 (30%)
fn3 1156..1244 CDD:278470 24/87 (28%)
fn3 1259..1346 CDD:278470 26/89 (29%)
cntn3a.2XP_001340839.5 Ig 28..119 CDD:299845 36/102 (35%)
Ig 126..214 CDD:299845 28/94 (30%)
Ig 227..315 CDD:299845 24/90 (27%)
I-set 227..308 CDD:254352 24/83 (29%)
I-set 318..403 CDD:254352 27/89 (30%)
Ig 319..403 CDD:299845 26/88 (30%)
IG_like 421..496 CDD:214653 24/74 (32%)
Ig 424..496 CDD:299845 23/71 (32%)
I-set 501..592 CDD:254352 26/94 (28%)
Ig 515..596 CDD:299845 25/84 (30%)
FN3 596..688 CDD:238020 36/96 (38%)
FN3 701..793 CDD:238020 31/102 (30%)
FN3 802..894 CDD:238020 25/95 (26%)
FN3 902..987 CDD:238020 27/94 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 67 1.000 Domainoid score I9761
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7461
Inparanoid 1 1.050 470 1.000 Inparanoid score I1476
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D292460at33208
OrthoFinder 1 1.000 - - FOG0000550
OrthoInspector 1 1.000 - - otm24534
orthoMCL 1 0.900 - - OOG6_100978
Panther 1 1.100 - - O PTHR10075
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X342
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.970

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