DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sfxn1-3 and Sfxn3

DIOPT Version :10

Sequence 1:NP_649460.3 Gene:Sfxn1-3 / 40552 FlyBaseID:FBgn0037239 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_444427.1 Gene:Sfxn3 / 94280 MGIID:2137679 Length:321 Species:Mus musculus


Alignment Length:322 Identity:178/322 - (55%)
Similarity:230/322 - (71%) Gaps:2/322 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSPLP-RVNIDEPKYDQNSYLGRAKHFFLLTNPLNVLASASKLEEARQIVIKYRAGKDVPECKTI 64
            |..|| .:||.||::||:::||||:|||.:|:|.|:|.|..:||.:|.||..||||...|.. |.
Mouse     1 MGDLPLNINIQEPRWDQSTFLGRARHFFTVTDPRNLLLSGEQLEASRNIVQNYRAGVATPGL-TE 64

  Fly    65 DDVWRAKYLYDSAFHPETGEKQIVIGRMAAQMPMNTIITGGMMAFYKSTPAVVFWQWFNQTFNAI 129
            |.:|||||:|||||||:||||.::||||:||:|||..|||.|:.||:.||.||||||.||:||||
Mouse    65 DQLWRAKYVYDSAFHPDTGEKVVLIGRMSAQVPMNMTITGCMLTFYRKTPTVVFWQWVNQSFNAI 129

  Fly   130 VNYTNRSGTSPISQQQLVTSYCLATSGALVTALSLNHAVKNMNPLLGRLVPLVAVGAANCINIPC 194
            |||:||||.:||:.|||.|:|..||:||:.|||.|....|::.||:||.||..||.||||||||.
Mouse   130 VNYSNRSGDAPITVQQLGTAYVSATTGAVATALGLKSLTKHLPPLVGRFVPFAAVAAANCINIPL 194

  Fly   195 MRMQELRNGVTLFDEHSNEMGISKKAAVVGISTVILSRIAMAIPGMTLTPVLMNVLEKRGFLAKY 259
            ||.:||:.|:.:.||....:|.|..||..||..|::|||.||||.|.:.||:||.|||:.||.:.
Mouse   195 MRQRELQVGIPVTDEAGQRLGHSVTAAKQGIFQVVISRIGMAIPAMAIPPVIMNTLEKKDFLKRR 259

  Fly   260 PRSNAPIQTLFCGFVLIFATPLGCAFFKQRADIKVDSLESEVRDSIRKKRPELETVWFNKGL 321
            |...||:|....||.|:|||||.||.|.||:.|.|..||.|:|..|:.:.|.::.|::||||
Mouse   260 PWLGAPLQVGLVGFCLVFATPLCCALFPQRSSIHVTRLEPELRAQIQAQNPSIDVVYYNKGL 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sfxn1-3NP_649460.3 SFXNs 8..321 CDD:461063 173/312 (55%)
Sfxn3NP_444427.1 SFXNs 9..321 CDD:461063 173/312 (55%)

Return to query results.
Submit another query.