DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sfxn1-3 and Sfxn2

DIOPT Version :10

Sequence 1:NP_649460.3 Gene:Sfxn1-3 / 40552 FlyBaseID:FBgn0037239 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_444426.3 Gene:Sfxn2 / 94279 MGIID:2137678 Length:322 Species:Mus musculus


Alignment Length:315 Identity:158/315 - (50%)
Similarity:213/315 - (67%) Gaps:2/315 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NIDEPKYDQNSYLGRAKHFFLLTNPLNVLASASKLEEARQIVIKYRAGKDVPECKTIDDVWRAKY 72
            |||.|::||.::|||.||||.:|:|..|.||..:|:.|:.:|.|.|.|. ||....::.:..||.
Mouse     9 NIDAPRWDQCTFLGRVKHFFNITDPRTVFASEQELDWAKAVVEKSRMGL-VPPGTQMEQLLYAKK 72

  Fly    73 LYDSAFHPETGEKQIVIGRMAAQMPMNTIITGGMMAFYKSTPAVVFWQWFNQTFNAIVNYTNRSG 137
            ||||||||:||||..|||||:.|:|...:|||.|:.||::.|||:||||.||:|||:||||||:.
Mouse    73 LYDSAFHPDTGEKMNVIGRMSFQVPGGMLITGFMLQFYRTMPAVIFWQWVNQSFNALVNYTNRNA 137

  Fly   138 TSPISQQQLVTSYCLATSGALVTALSLNHAVKNMNPLLGRLVPLVAVGAANCINIPCMRMQELRN 202
            .||.|.:|:..||..||:.|:.||:.:|...|...||:||.||..||.||||:|||.||.|||..
Mouse   138 ASPTSVRQMALSYFTATTTAVATAVGMNMWTKRAPPLVGRWVPFAAVAAANCVNIPMMRQQELIQ 202

  Fly   203 GVTLFDEHSNEMGISKKAAVVGISTVILSRIAMAIPGMTLTPVLMNVLEKRGFLAKYPRSNAPIQ 267
            |:.:.|.:.||:|.|::||.|||:.|::|||.||.|||.|.||:|..||:...:.|....:||:|
Mouse   203 GICVKDRNQNELGHSQRAAAVGIAQVVISRITMAAPGMILLPVIMERLERLHLMKKVKVMHAPLQ 267

  Fly   268 TLFCGFVLIFATPLGCAFFKQRADIKVDSLESEVRDSIRKKRPE-LETVWFNKGL 321
            .|.||..|:|..|:.|..|.|..::.|..||.|:||:|:.|..| :..|:|||||
Mouse   268 VLLCGCFLLFMVPVACGLFPQECELSVSYLEPELRDTIKAKYGEQVLFVYFNKGL 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sfxn1-3NP_649460.3 SFXNs 8..321 CDD:461063 156/313 (50%)
Sfxn2NP_444426.3 SFXNs 9..322 CDD:461063 156/313 (50%)

Return to query results.
Submit another query.