DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfxn1-3 and Sfxn4

DIOPT Version :10

Sequence 1:NP_649460.3 Gene:Sfxn1-3 / 40552 FlyBaseID:FBgn0037239 Length:321 Species:Drosophila melanogaster
Sequence 2:XP_006231746.1 Gene:Sfxn4 / 361778 RGDID:1306088 Length:316 Species:Rattus norvegicus


Alignment Length:311 Identity:69/311 - (22%)
Similarity:133/311 - (42%) Gaps:39/311 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SYLGRAKHFFLLTNPLNVLASASKLEEARQIVIKYRAGKDVP----ECKTIDDVWRAKYLYDSAF 78
            |:..|...:..|.:|:||..|...:|::||::.   ..:|.|    :.:.:.|.|....   |..
  Rat    17 SFFRRFCQWMDLLDPVNVFISVESIEKSRQLLF---TTEDAPKHYLDNQRVKDAWNKSL---STV 75

  Fly    79 HPETGEKQIVIGRMAAQMPMNTIITGGMMAFYKSTPAVVFWQWFNQTFNAIVNYTNRSGT---SP 140
            ||::.:....:.|.||.:|:...:...||.......:::..|.....:....|.||.:.:   .|
  Rat    76 HPDSSKLIPHLFRPAAFLPVTAPMVLLMMMPDTGIKSIILTQGCLYGYTTAFNITNGNASYSHGP 140

  Fly   141 ISQQQLVTSYCLATS---GALVTALSLNHAVKNMNPLLGRLVPLVAVGAANCINIPCMRMQELRN 202
            : ::.|:.:...|:|   |::.....|.:.:.|:  .|.|.:|::.:...:.:|:...|..|...
  Rat   141 V-ERTLLGAGVFASSTFFGSIPHLFQLKYPLNNL--WLKRFLPIIFLAQISGMNVFASRSFENHR 202

  Fly   203 GVTLFDEHSNEMGISKKAAVVGISTVILSRIAMAIPGMTLTPVL-MNVLEKRGFLAKYPRSNAPI 266
            |:.:.|:..:.:|.|:||....|.....|| |:......|.|.| :::.::..|   ||      
  Rat   203 GIEVMDKEGHVIGYSRKAGRKAIKETAKSR-AVLFGTSALAPELFIHIFKRTRF---YP------ 257

  Fly   267 QTLFCGFVLIFAT---------PLGCAFFKQRADIKVDSLESEVRDSIRKK 308
            |||....:|..::         |:..:.|.|...|:...||..:|.|..:|
  Rat   258 QTLLASVILRMSSTLFMMGLMVPVSFSMFPQIGQIQCSQLEEMIRSSTEEK 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sfxn1-3NP_649460.3 SFXNs 8..321 CDD:461063 69/311 (22%)
Sfxn4XP_006231746.1 SFXNs 15..315 CDD:470990 69/311 (22%)

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