DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sfxn1-3 and sfxn2

DIOPT Version :10

Sequence 1:NP_649460.3 Gene:Sfxn1-3 / 40552 FlyBaseID:FBgn0037239 Length:321 Species:Drosophila melanogaster
Sequence 2:XP_073773542.1 Gene:sfxn2 / 334757 ZFINID:ZDB-GENE-040426-2831 Length:337 Species:Danio rerio


Alignment Length:322 Identity:153/322 - (47%)
Similarity:213/322 - (66%) Gaps:2/322 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSPLPRVNIDEPKYDQNSYLGRAKHFFLLTNPLNVLASASKLEEARQIVIKYRAGKDVPECKTID 65
            |..:...:||.|::||::::||.||||.:|:....|...|:|:||:.:|...||| .||...|.:
Zfish    17 MEAVKGFDIDAPRWDQSTFMGRLKHFFNITDCRTALLPDSRLDEAKVLVESCRAG-SVPPGTTEE 80

  Fly    66 DVWRAKYLYDSAFHPETGEKQIVIGRMAAQMPMNTIITGGMMAFYKSTPAVVFWQWFNQTFNAIV 130
            .:..||.||||||||:||::..:||||:.|:|....|||.|:.||::.||||||||.||:|||:|
Zfish    81 QLHYAKKLYDSAFHPDTGDRMNLIGRMSFQVPGGMAITGFMLQFYRTVPAVVFWQWVNQSFNALV 145

  Fly   131 NYTNRSGTSPISQQQLVTSYCLATSGALVTALSLNHAVKNMNPLLGRLVPLVAVGAANCINIPCM 195
            |||||:..|||:.:|:..:|..|||.||.||:.||...|...||:.|.||..||.||||:|||.|
Zfish   146 NYTNRNAASPITPKQIGVAYVTATSTALATAVGLNLYTKKAPPLVARWVPFAAVAAANCVNIPMM 210

  Fly   196 RMQELRNGVTLFDEHSNEMGISKKAAVVGISTVILSRIAMAIPGMTLTPVLMNVLEKRGFLAKYP 260
            |.||:.:|:.:.||..|::|.|:||||.||:.|::||:.||.|||.:.|::|..|||..|:.|..
Zfish   211 RQQEILHGIAVTDEDGNKLGHSRKAAVKGITQVVISRVTMAAPGMIILPIIMQRLEKHRFMQKIT 275

  Fly   261 RSNAPIQTLFCGFVLIFATPLGCAFFKQRADIKVDSLESEVRDSIRKKRPE-LETVWFNKGL 321
            ..:.|:|.:..|..|||..|..|:.|.||..:.|..||.|:|:||..:..| :..|:|||||
Zfish   276 FLHGPLQVMMVGVFLIFMVPAACSLFPQRCSMAVSKLEPELRESIISQYGEQISHVYFNKGL 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sfxn1-3NP_649460.3 SFXNs 8..321 CDD:461063 150/313 (48%)
sfxn2XP_073773542.1 None

Return to query results.
Submit another query.