DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sfxn1-3 and Sfxn1

DIOPT Version :10

Sequence 1:NP_649460.3 Gene:Sfxn1-3 / 40552 FlyBaseID:FBgn0037239 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001415550.1 Gene:Sfxn1 / 14057 MGIID:2137677 Length:344 Species:Mus musculus


Alignment Length:339 Identity:172/339 - (50%)
Similarity:233/339 - (68%) Gaps:23/339 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PRVNIDEPKYDQNSYLGRAKHFFLLTNPLNVLASASKLEEARQIVIKYRAGKDVPECKTIDDVWR 69
            |.:||.||::||::::|||.|||.:|:|.|:|.:..:||.||::|..||.| .||...|.:::||
Mouse     7 PNINIKEPRWDQSTFIGRASHFFTVTDPRNILLTNEQLENARKVVHDYRQG-IVPAGLTENELWR 70

  Fly    70 AKYLYDSAFHPETGEKQIVIGRMAAQMPMNTIITGGMMAFYKSTPAVVFWQWFNQTFNAIVNYTN 134
            |||.|||||||:||||..:||||:||:|||..|||.||.||::||||:||||.||:|||:|||||
Mouse    71 AKYAYDSAFHPDTGEKMTLIGRMSAQVPMNMTITGCMMTFYRTTPAVLFWQWINQSFNAVVNYTN 135

  Fly   135 RSGTSPISQQQLVTSYCLATSGALVTALSLNHAVKNMNPLLGRLVPLVAVGAANCINIPCMRM-- 197
            |||.:|::..:|.|:|..||:||:.|||.||...|.::||:||.||..||.||||||||.||.  
Mouse   136 RSGDAPLTVNELGTAYVSATTGAVATALGLNALTKRVSPLIGRFVPFAAVAAANCINIPLMRQRN 200

  Fly   198 --------------------QELRNGVTLFDEHSNEMGISKKAAVVGISTVILSRIAMAIPGMTL 242
                                :||:.|:.:.||:...:|.|..||...|:.|::|||.||.|||.:
Mouse   201 IEINLAFELAYPPLKSIIIERELKVGIPVTDENGTRLGESTNAAKQAITQVVISRILMAAPGMAI 265

  Fly   243 TPVLMNVLEKRGFLAKYPRSNAPIQTLFCGFVLIFATPLGCAFFKQRADIKVDSLESEVRDSIRK 307
            .|.:||.|||:.||.::|..:||||....||.|:|||||.||.|.|::.:.|.|||.|::.||::
Mouse   266 PPFIMNTLEKKAFLKRFPWMSAPIQVTLVGFCLVFATPLCCALFPQKSSMSVTSLEDELQASIQR 330

  Fly   308 KRPELETVWFNKGL 321
            ..||:..|:|||||
Mouse   331 THPEIRRVYFNKGL 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sfxn1-3NP_649460.3 SFXNs 8..321 CDD:461063 169/334 (51%)
Sfxn1NP_001415550.1 SFXNs 10..344 CDD:461063 169/334 (51%)

Return to query results.
Submit another query.