DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hkb and Klf5

DIOPT Version :10

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_445846.3 Gene:Klf5 / 84410 RGDID:621446 Length:443 Species:Rattus norvegicus


Alignment Length:299 Identity:86/299 - (28%)
Similarity:112/299 - (37%) Gaps:76/299 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 AATSAAP---------RTVKQEPEAITIKTEL--------ASSSFGH--------DCDGDFSSAS 64
            |.|.|.|         :|...|...|.||.||        ..|..||        |.|...|:..
  Rat   171 APTQALPEFTSIFSSHQTTAPEVNNIFIKQELPIPDLHLSVPSQQGHLYQLLNTPDLDMPSSTNQ 235

  Fly    65 SSASSSSNSSK---SCYEEALNHSS-----------YTRTSTPLLDAA----PHPVFSHPQSSPL 111
            ::...:.|.|.   :.:..|:..:|           ||..|..|...|    |.|..|.| .|| 
  Rat   236 TAVMDTLNVSMAGLNSHPSAVPQTSMKQFQGMPPCTYTMPSQFLPQQATYFPPSPPSSEP-GSP- 298

  Fly   112 DTHAAATASLAPPNQHAPFLSAASDLYYAAAAAAAAAASTPTAVPGFGMDPFTM-----GLMEQE 171
            |..|....:|.||..            |||..|:..|...|..       |.|:     .:....
  Rat   299 DRQAEMLQNLTPPPS------------YAATIASKLAIHNPNL-------PATLPVNSPNIQPVR 344

  Fly   172 YARVMAEDAQLKALNSRKQRPKKFKCPNCDVAFSNNGQLKGHIRIHTGERPFKCDVNTCGKTFTR 236
            |.|....|.:       |:|........|...::.:..||.|:|.||||:|:||....|...|.|
  Rat   345 YNRRSNPDLE-------KRRIHFCDYDGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 402

  Fly   237 NEELTRHKRIHTGLRPYPCSACGKKFGRRDHLKKHMKTH 275
            ::|||||.|.|||.:|:.|..|.:.|.|.|||..|||.|
  Rat   403 SDELTRHYRKHTGAKPFQCVVCNRSFSRSDHLALHMKRH 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 27/65 (42%)
C2H2 Zn finger 197..217 CDD:275368 5/19 (26%)
C2H2 Zn finger 225..247 CDD:275368 10/21 (48%)
zf-C2H2 253..275 CDD:395048 10/21 (48%)
C2H2 Zn finger 255..275 CDD:275368 10/19 (53%)
Klf5NP_445846.3 KLF5_N 3..356 CDD:410335 48/212 (23%)
COG5048 345..>419 CDD:227381 29/80 (36%)
C2H2 Zn finger 361..383 CDD:275368 5/21 (24%)
C2H2 Zn finger 391..413 CDD:275368 10/21 (48%)
zf-C2H2 419..441 CDD:395048 10/21 (48%)
C2H2 Zn finger 421..441 CDD:275368 10/19 (53%)

Return to query results.
Submit another query.