DRSC/TRiP Functional Genomics Resources

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Protein Alignment hkb and ZIC4

DIOPT Version :10

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_001161850.1 Gene:ZIC4 / 84107 HGNCID:20393 Length:384 Species:Homo sapiens


Alignment Length:288 Identity:75/288 - (26%)
Similarity:107/288 - (37%) Gaps:71/288 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KQEPEAITIKTEL---------------ASSSFGHDCDGDFSSASSSASSSSNSSKSCYEEALNH 84
            |.:.:.:..||.|               :|||.||      .....:|:||.:.....:||. ..
Human    45 KAQSQKMRYKTSLVMRKRLRLYRNTLKESSSSSGH------HGPQLTAASSPSVFPGLHEEP-PQ 102

  Fly    85 SSYTRTSTPLLD-AAPHPVFSHPQSSP------LDTHAAA-----------TASLAPPNQHAP-- 129
            :|.:|....||. ..|..:::.|:..|      .|..|||           |.:||.|  |.|  
Human   103 ASPSRPLNGLLRLGLPGDMYARPEPFPPGPAARSDALAAAAALHGYGGMNLTVNLAAP--HGPGA 165

  Fly   130 ---FLSAASDLYYAAAAAAAAAASTPTAVPGFGMDPFTMGLMEQEYARVMAEDAQLKALNSRKQR 191
               ::.............||...:||:      :...|...|.:....|..|..         ..
Human   166 FFRYMRQPIKQELICKWLAADGTATPS------LCSKTFSTMHELVTHVTVEHV---------GG 215

  Fly   192 PKKF-------KCPNCDVAFSNNGQLKGHIRIHTGERPFKCDVNTCGKTFTRNEELTRHKRIHTG 249
            |::.       :||.....|....:|..|||:||||:||.|....|||.|.|:|.|..|||.|||
Human   216 PEQANHICFWEECPRQGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTG 280

  Fly   250 LRPYPC--SACGKKFGRRDHLKKHMKTH 275
            .:|:.|  ..|.::|......|||...|
Human   281 EKPFRCEFEGCERRFANSSDRKKHSHVH 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 30/74 (41%)
C2H2 Zn finger 197..217 CDD:275368 7/19 (37%)
C2H2 Zn finger 225..247 CDD:275368 11/21 (52%)
zf-C2H2 253..275 CDD:395048 6/23 (26%)
C2H2 Zn finger 255..275 CDD:275368 6/21 (29%)
ZIC4NP_001161850.1 zf_ZIC 172..216 CDD:436441 8/58 (14%)
COG5048 <192..338 CDD:227381 40/132 (30%)
C2H2 Zn finger 228..248 CDD:275368 7/19 (37%)
C2H2 Zn finger 256..278 CDD:275368 11/21 (52%)
C2H2 Zn finger 286..308 CDD:275368 6/21 (29%)
C2H2 Zn finger 316..338 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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