DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hkb and klf13

DIOPT Version :10

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_001070240.1 Gene:klf13 / 767805 ZFINID:ZDB-GENE-060929-1274 Length:258 Species:Danio rerio


Alignment Length:238 Identity:66/238 - (27%)
Similarity:96/238 - (40%) Gaps:51/238 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LASSSFGHDCDGDFSSASSSASSSSNSSKSCYEEALNHSSYTRTSTPLLDAAPHPVFSHPQSSPL 111
            ::|.:..|...|:..:...:|::..|..:: .|...::||....:..|.|      |:....:..
Zfish    12 MSSQAIVHGPKGNRETKPETAAAQRNGEEA-KEPLKDNSSLFVVARILAD------FNQQTPASF 69

  Fly   112 DTHAAATASLAPPNQHAPFLSAASDLYYAAAAAAAAAASTPTAVPGFGMDPFTMGLMEQEYARVM 176
            ...|.......||.              |..:.....::||||:||                   
Zfish    70 AEQAKIKEESTPPT--------------ATPSGDDGNSATPTAIPG------------------- 101

  Fly   177 AEDAQLKALNSR------KQRP-KKFKC--PNCDVAFSNNGQLKGHIRIHTGERPFKCDVNTCGK 232
              |:.||....|      ...| ||.||  ..|:..:..:..||.|:|.|||||||.|....|.|
Zfish   102 --DSALKQRGKRFRGRVEHDAPQKKHKCHYSGCEKVYGKSSHLKAHLRTHTGERPFPCTWPDCSK 164

  Fly   233 TFTRNEELTRHKRIHTGLRPYPCSACGKKFGRRDHLKKHMKTH 275
            .|.|::||.||.|.|||.:.:.|..|.|:|.|.|||.||.:.|
Zfish   165 KFARSDELARHYRTHTGEKKFGCPLCDKRFMRSDHLMKHARRH 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 29/67 (43%)
C2H2 Zn finger 197..217 CDD:275368 6/21 (29%)
C2H2 Zn finger 225..247 CDD:275368 10/21 (48%)
zf-C2H2 253..275 CDD:395048 10/21 (48%)
C2H2 Zn finger 255..275 CDD:275368 10/19 (53%)
klf13NP_001070240.1 KLF13_N 1..126 CDD:409236 28/155 (18%)
C2H2 Zn finger 127..149 CDD:275368 6/21 (29%)
zf-H2C2_2 141..168 CDD:463886 15/26 (58%)
COG5048 <156..249 CDD:227381 24/52 (46%)
C2H2 Zn finger 157..179 CDD:275368 10/21 (48%)
zf-H2C2_2 171..194 CDD:463886 11/22 (50%)
C2H2 Zn finger 187..207 CDD:275368 10/19 (53%)

Return to query results.
Submit another query.