DRSC/TRiP Functional Genomics Resources

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Protein Alignment hkb and zic4

DIOPT Version :10

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_001070080.3 Gene:zic4 / 767673 ZFINID:ZDB-GENE-040622-4 Length:530 Species:Danio rerio


Alignment Length:82 Identity:35/82 - (42%)
Similarity:44/82 - (53%) Gaps:2/82 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 KCPNCDVAFSNNGQLKGHIRIHTGERPFKCDVNTCGKTFTRNEELTRHKRIHTGLRPYPC--SAC 258
            :||.....|....:|..|||:||||:||.|....|||.|.|:|.|..|||.|||.:|:.|  ..|
Zfish   332 ECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFKCEFDGC 396

  Fly   259 GKKFGRRDHLKKHMKTH 275
            .::|......|||...|
Zfish   397 DRRFANSSDRKKHSHVH 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 30/66 (45%)
C2H2 Zn finger 197..217 CDD:275368 7/19 (37%)
C2H2 Zn finger 225..247 CDD:275368 11/21 (52%)
zf-C2H2 253..275 CDD:395048 6/23 (26%)
C2H2 Zn finger 255..275 CDD:275368 6/21 (29%)
zic4NP_001070080.3 None

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