DRSC/TRiP Functional Genomics Resources

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Protein Alignment hkb and Klf6

DIOPT Version :10

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_113830.2 Gene:Klf6 / 58954 RGDID:62389 Length:317 Species:Rattus norvegicus


Alignment Length:272 Identity:72/272 - (26%)
Similarity:110/272 - (40%) Gaps:59/272 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 WDTQRQAATSAAPRTVKQEPEAITIKT-----ELASSSFGHDCDGDFSSASSSASSSSNSSKSCY 78
            :|.|....|.......::|...:.|.:     .|.||.|.::.  :.:|.:|..||.|:.|.   
  Rat    91 FDNQEDLWTKIILARERKEESELKISSSPPEDSLISSGFNYNL--ETNSLNSDVSSESSDSS--- 150

  Fly    79 EEALNHSSYTRTSTPLLDAAPH------PVFSHPQSSP-LDTHAAATASLAPPNQHAPFLSAASD 136
            ||....:.:  ||.|:.:...:      .|.|.|.||| ::..::......|.:..:|       
  Rat   151 EELSPTTKF--TSDPIGEVLVNSGNLSSSVISTPPSSPEVNRESSQLWGCGPGDLPSP------- 206

  Fly   137 LYYAAAAAAAAAASTPTAVPGFGMDPFTMGLMEQEYARVMAEDAQLKALNSRKQRPKKFKC--PN 199
                  ....:..|..:...|.|                   ||      |...|.:..:|  ..
  Rat   207 ------GKVRSGTSGKSGDKGSG-------------------DA------SPDGRRRVHRCHFNG 240

  Fly   200 CDVAFSNNGQLKGHIRIHTGERPFKCDVNTCGKTFTRNEELTRHKRIHTGLRPYPCSACGKKFGR 264
            |...::.:..||.|.|.||||:|::|....|...|.|::|||||.|.|||.:|:.||.|.:.|.|
  Rat   241 CRKVYTKSSHLKAHQRTHTGEKPYRCSWEGCEWRFARSDELTRHFRKHTGAKPFKCSHCDRCFSR 305

  Fly   265 RDHLKKHMKTHM 276
            .|||..|||.|:
  Rat   306 SDHLALHMKRHL 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 28/67 (42%)
C2H2 Zn finger 197..217 CDD:275368 6/21 (29%)
C2H2 Zn finger 225..247 CDD:275368 10/21 (48%)
zf-C2H2 253..275 CDD:395048 11/21 (52%)
C2H2 Zn finger 255..275 CDD:275368 11/19 (58%)
Klf6NP_113830.2 KLF6_N 36..235 CDD:409245 35/188 (19%)
C2H2 Zn finger 239..258 CDD:275368 5/18 (28%)
C2H2 Zn finger 266..288 CDD:275368 10/21 (48%)
zf-H2C2_2 280..305 CDD:463886 14/24 (58%)
zf-C2H2 294..316 CDD:395048 11/21 (52%)
C2H2 Zn finger 296..316 CDD:275368 11/19 (58%)

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