DRSC/TRiP Functional Genomics Resources

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Protein Alignment hkb and znf1068

DIOPT Version :10

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_001104669.1 Gene:znf1068 / 569852 ZFINID:ZDB-GENE-080215-12 Length:419 Species:Danio rerio


Alignment Length:99 Identity:43/99 - (43%)
Similarity:55/99 - (55%) Gaps:6/99 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 KKFKCPNCDVAFSNNGQLKGHIRIHTGERPFKCDVNTCGKTFTRNEELTRHKRIHTGLRPYPCSA 257
            |.:.||.|..:|.:||.||.|:|.||||||:.|  ..||:.|.....|..|.|||||.|||.|..
Zfish   135 KPYSCPQCGKSFKHNGNLKVHMRTHTGERPYTC--QQCGQCFYTTGNLAAHMRIHTGERPYTCQQ 197

  Fly   258 CGKKFGRRDHLKKHMKTHMPQE----RQLGPSIF 287
            |||.|.:..:|..||:.|..:.    :|.|.|.:
Zfish   198 CGKSFYQSANLAAHMRIHTGERPYTCQQCGKSFY 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 33/65 (51%)
C2H2 Zn finger 197..217 CDD:275368 10/19 (53%)
C2H2 Zn finger 225..247 CDD:275368 7/21 (33%)
zf-C2H2 253..275 CDD:395048 9/21 (43%)
C2H2 Zn finger 255..275 CDD:275368 8/19 (42%)
znf1068NP_001104669.1 C2H2 Zn finger 83..103 CDD:275368
COG5048 107..>411 CDD:227381 43/99 (43%)
C2H2 Zn finger 111..131 CDD:275368
C2H2 Zn finger 139..159 CDD:275368 10/19 (53%)
C2H2 Zn finger 167..187 CDD:275368 7/21 (33%)
C2H2 Zn finger 195..215 CDD:275368 8/19 (42%)
C2H2 Zn finger 223..243 CDD:275368 3/9 (33%)
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368
C2H2 Zn finger 363..383 CDD:275368
C2H2 Zn finger 391..411 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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