DRSC/TRiP Functional Genomics Resources

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Protein Alignment hkb and sp2

DIOPT Version :9

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_001093452.2 Gene:sp2 / 556835 ZFINID:ZDB-GENE-080410-1 Length:610 Species:Danio rerio


Alignment Length:305 Identity:81/305 - (26%)
Similarity:115/305 - (37%) Gaps:87/305 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 QRQAATSAAPRTVKQEPEAITIKTELASSSFGHDCDGDFSSASSSASSSSNSSKSCYEEALNHSS 86
            |||..|.:. :....||..:.|||          ..|::.:..                 :..::
Zfish   338 QRQTVTPSV-QVSPPEPTQVLIKT----------ASGEWQAVQ-----------------IQETT 374

  Fly    87 YTRTSTPLLDAAPHPVFSHPQSSPLDTHAAAT-ASLAPPNQHAPFLSAASDLYYAAAAAAAAAAS 150
            .|..:||.....|..|....|:.   |....| ..:||.......|:||.   .|:||.|....:
Zfish   375 VTTPTTPTSTPTPAVVTKKVQTG---TRKERTLPKIAPAGGGLITLNAAQ---LASAAQAVQTIN 433

  Fly   151 ----------------------TPTAVPGFGMDPFTMGLMEQEYARVMAEDAQLKALN-----SR 188
                                  |...||..|:.   :|.::.:...:..|..|..||.     ..
Zfish   434 INGVQVQGVPVTITNAGGQQHLTVQTVPSAGLQ---LGSVQTQTQTMQIEQTQTLALELQTQPGE 495

  Fly   189 KQRPKKFKCPN----------------------CDVAFSNNGQLKGHIRIHTGERPFKCDVNTCG 231
            |:|.....|||                      |:..|.....|:.|:|:|||||||.|:...||
Zfish   496 KKRRMACTCPNCKDAEKKPGEVGKRKHICHIAGCEKTFRKTSLLRAHVRLHTGERPFVCNWVFCG 560

  Fly   232 KTFTRNEELTRHKRIHTGLRPYPCSACGKKFGRRDHLKKHMKTHM 276
            |.|||::||.||.|.|||.:.:.|:.|.|:|.|.|||.||.|||:
Zfish   561 KRFTRSDELQRHARTHTGDKRFECNKCQKRFMRSDHLTKHYKTHI 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 32/87 (37%)
zf-C2H2 195..217 CDD:278523 8/43 (19%)
C2H2 Zn finger 197..217 CDD:275368 8/41 (20%)
zf-H2C2_2 210..236 CDD:290200 15/25 (60%)
C2H2 Zn finger 225..247 CDD:275368 12/21 (57%)
zf-H2C2_2 239..264 CDD:290200 12/24 (50%)
C2H2 Zn finger 255..275 CDD:275368 11/19 (58%)
sp2NP_001093452.2 C2H2 Zn finger 524..546 CDD:275368 5/21 (24%)
COG5048 <529..>584 CDD:227381 27/54 (50%)
zf-H2C2_2 539..565 CDD:290200 15/25 (60%)
C2H2 Zn finger 554..576 CDD:275368 12/21 (57%)
zf-H2C2_2 568..591 CDD:290200 11/22 (50%)
zf-C2H2 582..604 CDD:278523 11/21 (52%)
C2H2 Zn finger 584..604 CDD:275368 11/19 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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