DRSC/TRiP Functional Genomics Resources

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Protein Alignment hkb and zgc:113102

DIOPT Version :9

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:XP_009297414.1 Gene:zgc:113102 / 503754 ZFINID:ZDB-GENE-050306-35 Length:281 Species:Danio rerio


Alignment Length:103 Identity:46/103 - (44%)
Similarity:62/103 - (60%) Gaps:5/103 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 AQLKALNSRKQ---RPKKFKCPNCDVAFSNNGQLKGHIRIHTGERPFKCDVNTCGKTFTRNEELT 241
            :||.:|...|:   ..|.:||..||..|:.:|.||.|.||||||:|:||  :.|.|.|.::..|.
Zfish   171 SQLGSLIKHKRIHTGEKPYKCSYCDKRFNQSGILKKHERIHTGEKPYKC--SHCDKRFNQSGILK 233

  Fly   242 RHKRIHTGLRPYPCSACGKKFGRRDHLKKHMKTHMPQE 279
            .|:|||||.:||.||.||.:||....|..|:|.|..:|
Zfish   234 THERIHTGEKPYMCSHCGMRFGHSFSLTSHIKIHSRKE 271

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 34/65 (52%)
zf-C2H2 195..217 CDD:278523 10/21 (48%)
C2H2 Zn finger 197..217 CDD:275368 9/19 (47%)
zf-H2C2_2 210..236 CDD:290200 15/25 (60%)
C2H2 Zn finger 225..247 CDD:275368 7/21 (33%)
zf-H2C2_2 239..264 CDD:290200 14/24 (58%)
C2H2 Zn finger 255..275 CDD:275368 9/19 (47%)
zgc:113102XP_009297414.1 C2H2 Zn finger 23..43 CDD:275368
zf-H2C2_2 35..60 CDD:290200
C2H2 Zn finger 51..71 CDD:275368
C2H2 Zn finger 79..99 CDD:275368
C2H2 Zn finger 107..127 CDD:275368
C2H2 Zn finger 135..155 CDD:275368