DRSC/TRiP Functional Genomics Resources

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Protein Alignment hkb and egr3

DIOPT Version :10

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_001002647.1 Gene:egr3 / 436920 ZFINID:ZDB-GENE-040718-394 Length:422 Species:Danio rerio


Alignment Length:293 Identity:75/293 - (25%)
Similarity:113/293 - (38%) Gaps:109/293 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GDFSSASSSASSSSNSSKSCYEEALNHSSYTRTSTPLLDAAPHPVFS-----HPQSSPLDTHAAA 117
            |:.::.:||:|.|.....|..|:..              |.|.|.:|     :|:..... |:.|
Zfish   127 GNITTQTSSSSGSMGGQSSDMEQVY--------------APPLPAYSTCGEIYPEQVTFH-HSPA 176

  Fly   118 TASLAPPNQHAPFLSAASDLYYAAAAAAAAAASTPTAVPGFGMDPFTM-------------GLME 169
            |:|..|        ..:||.:             .|:.||.....|:|             |:||
Zfish   177 TSSSLP--------YPSSDYH-------------TTSKPGMDGSLFSMIPDYNLFHHQGDVGVME 220

  Fly   170 QEYARVM------------------------------------------AEDAQLKALNSRK--Q 190
            .:..:.|                                          ::...||.:..||  .
Zfish   221 HKPFQTMDPIRVNPPPITPLETIRAFKDKQQIHPGFLGGQQHVSQHHQPSQTLALKPIRPRKYPN 285

  Fly   191 RPKK-------FKCP--NCDVAFSNNGQLKGHIRIHTGERPFKCDVNTCGKTFTRNEELTRHKRI 246
            ||.|       ..||  |||..||.:.:|..|:|||||.:||:|.:  |.::|:|::.||.|.|.
Zfish   286 RPSKTPVHERPHACPAENCDRRFSRSDELTRHLRIHTGHKPFQCRI--CMRSFSRSDHLTTHIRT 348

  Fly   247 HTGLRPYPCSACGKKFGRRDHLKKHMKTHMPQE 279
            |||.:|:.|..||:||.|.|..|:|.|.|:.|:
Zfish   349 HTGEKPFSCEFCGRKFARSDERKRHAKVHLKQK 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 31/67 (46%)
C2H2 Zn finger 197..217 CDD:275368 10/21 (48%)
C2H2 Zn finger 225..247 CDD:275368 8/21 (38%)
zf-C2H2 253..275 CDD:395048 10/21 (48%)
C2H2 Zn finger 255..275 CDD:275368 10/19 (53%)
egr3NP_001002647.1 DUF3446 88..185 CDD:463400 17/80 (21%)
zf-C2H2 297..321 CDD:395048 10/23 (43%)
C2H2 Zn finger 299..321 CDD:275368 10/21 (48%)
COG5048 325..>405 CDD:227381 26/59 (44%)
C2H2 Zn finger 329..349 CDD:275368 8/21 (38%)
zf-H2C2_2 341..366 CDD:463886 13/24 (54%)
C2H2 Zn finger 357..377 CDD:275368 10/19 (53%)

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