DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hkb and CG3065

DIOPT Version :10

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_611861.1 Gene:CG3065 / 37818 FlyBaseID:FBgn0034946 Length:400 Species:Drosophila melanogaster


Alignment Length:210 Identity:70/210 - (33%)
Similarity:93/210 - (44%) Gaps:24/210 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 TSTPLLDAAPHPVFSHPQSSPLDTHAAATASLAPPNQHAPFLSAASDLYYAAAAAAAAAASTPTA 154
            ||||:....|.|.|  |..|..:.|          .|.:..:..||.::.......|...:    
  Fly    16 TSTPIEPMKPPPAF--PTMSGANIH----------EQASDMILRASTIFEDVKHDEANVEN---- 64

  Fly   155 VPGFGM-----DPFTMGLMEQEYARVMAEDAQLKALNSRKQRPKKFKCP--NCDVAFSNNGQLKG 212
            ||..|:     |....|.......|:| ...:|.|........:||.||  ||..::..:..|:.
  Fly    65 VPHHGVETEPEDDSHYGGNGNSKIRIM-PSVKLMATTLASDPKRKFVCPYDNCTKSYGKSSHLRS 128

  Fly   213 HIRIHTGERPFKCDVNTCGKTFTRNEELTRHKRIHTGLRPYPCSACGKKFGRRDHLKKHMKTHMP 277
            |:..|||.:||.|....|||.|||::||.||.|.|||.:|:.|..|.|||.|.|||.||:.||..
  Fly   129 HLTWHTGIKPFVCSEPKCGKGFTRSDELNRHLRTHTGEKPFECIQCTKKFSRSDHLTKHLATHDR 193

  Fly   278 QERQLGPSIFVPMYS 292
            |.:...|...||..|
  Fly   194 QLKGSTPKRTVPSSS 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 30/67 (45%)
C2H2 Zn finger 197..217 CDD:275368 6/21 (29%)
C2H2 Zn finger 225..247 CDD:275368 12/21 (57%)
zf-C2H2 253..275 CDD:395048 11/21 (52%)
C2H2 Zn finger 255..275 CDD:275368 11/19 (58%)
CG3065NP_611861.1 COG5048 99..>400 CDD:227381 47/110 (43%)
C2H2 Zn finger 111..133 CDD:275368 6/21 (29%)
C2H2 Zn finger 141..163 CDD:275368 12/21 (57%)
C2H2 Zn finger 171..191 CDD:275368 11/19 (58%)
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.