DRSC/TRiP Functional Genomics Resources

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Protein Alignment hkb and cbt

DIOPT Version :10

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster


Alignment Length:311 Identity:95/311 - (30%)
Similarity:128/311 - (41%) Gaps:76/311 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PWDTQRQAATSAAP-RTVKQEPEAITI------------KTELASSSFGHDCDGDFSSASSSASS 69
            |.||:.:|...|.| :..:.|..|:::            |.|..|.....:..|..|  |||...
  Fly    58 PSDTEDEAPEIAVPNKKPRLEQPAMSMTPPPDQKLDDDQKAERVSVIMRVNSSGAVS--SSSQDE 120

  Fly    70 SSNSSKSCYEEALNHSSYTRTSTPLLDAAPHPVFSHPQSS--------------------PLDTH 114
            :|:||.||    .:.||.|.|||.  ...|.....:|:::                    |:.|.
  Fly   121 NSSSSTSC----CSSSSNTNTSTS--SVPPTVEDDYPEANVWRNLKFKMNRKRAAEVALPPVQTP 179

  Fly   115 AAATASLAPPNQHA------------------PFLSAASDLYYAAAAAAAAAASTPTAVPGFGMD 161
            ....|.|..|...|                  |..|:||.|   ...:..||..:||.||     
  Fly   180 ETPVAKLVTPPAPAECIKEEEIKPILTPIYVSPVASSASQL---ILLSTVAAQQSPTPVP----- 236

  Fly   162 PFTMGLMEQEYARVMAEDAQLKALNSRKQRPKKFKC--PNCDVAFSNNGQLKGHIRIHTGERPFK 224
              ....|.:|........||..|..||     .::|  |:|...:..:..||.|.|:|||||||.
  Fly   237 --KTPTMSEEKLTTRITAAQAAATRSR-----IYECSFPDCGKNYFKSSHLKAHQRVHTGERPFI 294

  Fly   225 CDVNTCGKTFTRNEELTRHKRIHTGLRPYPCSACGKKFGRRDHLKKHMKTH 275
            |....|.|.|:|::||:||||.|||.:.:.||.|.|||.|.|||.||:|.|
  Fly   295 CKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKRH 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 31/67 (46%)
C2H2 Zn finger 197..217 CDD:275368 7/21 (33%)
C2H2 Zn finger 225..247 CDD:275368 11/21 (52%)
zf-C2H2 253..275 CDD:395048 13/21 (62%)
C2H2 Zn finger 255..275 CDD:275368 13/19 (68%)
cbtNP_722636.1 C2H2 Zn finger 265..287 CDD:275368 7/21 (33%)
COG5048 <270..362 CDD:227381 40/76 (53%)
C2H2 Zn finger 295..317 CDD:275368 11/21 (52%)
zf-H2C2_2 309..332 CDD:463886 13/22 (59%)
C2H2 Zn finger 325..345 CDD:275368 13/19 (68%)

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