DRSC/TRiP Functional Genomics Resources

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Protein Alignment hkb and sp5l

DIOPT Version :10

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_919352.1 Gene:sp5l / 324261 ZFINID:ZDB-GENE-030131-2981 Length:357 Species:Danio rerio


Alignment Length:292 Identity:80/292 - (27%)
Similarity:117/292 - (40%) Gaps:77/292 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 DGDFSSASS-----SASSSSNSSKSCYEEALN--HSSYTRTSTPLLDAAPHPVFSH-------PQ 107
            :|...||||     |...:.|||.|.::....  ...:.....|.|.:..|....|       |.
Zfish    53 EGPVGSASSMFQLWSNDVAPNSSLSAHQMTFTVPKMQFPSHMQPTLGSHSHHHHHHHHHHHELPL 117

  Fly   108 SSPLDTHAAATASLAPPNQ--HAPFL---SAASDLYYAAAAAAAAAASTP--------------- 152
            :.|.:..:|.:..|:|...  :||:.   :|.|..:.:.....:..|..|               
Zfish   118 TPPAEPPSAYSFELSPVKMQGNAPYYTQHNAVSQNFPSFLQNPSGRAHLPGGHVEDGQQWWSLPQ 182

  Fly   153 --TAVPGFGMDPFTMGLMEQEYARVMAEDAQL--------KALNSRKQRPKKFKCPNCD------ 201
              :|..|   .||::|..     .|:....|:        |.|.|..:|.::.|||||.      
Zfish   183 GNSAPSG---HPFSLGRQ-----LVLGHQPQIAALLQGTSKGLLSSTRRCRRCKCPNCQSTGNGG 239

  Fly   202 -------------------VAFSNNGQLKGHIRIHTGERPFKCDVNTCGKTFTRNEELTRHKRIH 247
                               ..:.....||.|:|.|.|||||.|:...|||:|||::||.||.|.|
Zfish   240 AALEFGKKRLHICHIPDCGKVYKKTSHLKAHLRWHAGERPFICNWLFCGKSFTRSDELQRHLRTH 304

  Fly   248 TGLRPYPCSACGKKFGRRDHLKKHMKTHMPQE 279
            ||.:.:.|..|||:|.|.|||.||:|||..::
Zfish   305 TGEKRFGCQQCGKRFMRSDHLSKHVKTHQSRK 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 33/90 (37%)
C2H2 Zn finger 197..217 CDD:275368 8/44 (18%)
C2H2 Zn finger 225..247 CDD:275368 12/21 (57%)
zf-C2H2 253..275 CDD:395048 12/21 (57%)
C2H2 Zn finger 255..275 CDD:275368 12/19 (63%)
sp5lNP_919352.1 SP5_N 114..251 CDD:412096 27/144 (19%)
C2H2 Zn finger 255..274 CDD:275368 4/18 (22%)
zf-C2H2 280..304 CDD:395048 13/23 (57%)
C2H2 Zn finger 282..304 CDD:275368 12/21 (57%)
zf-H2C2_2 296..319 CDD:463886 12/22 (55%)
C2H2 Zn finger 312..332 CDD:275368 12/19 (63%)
zf-C2H2 312..332 CDD:395048 12/19 (63%)

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