DRSC/TRiP Functional Genomics Resources

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Protein Alignment hkb and sp8a

DIOPT Version :10

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_998406.2 Gene:sp8a / 321264 ZFINID:ZDB-GENE-030131-9849 Length:406 Species:Danio rerio


Alignment Length:336 Identity:96/336 - (28%)
Similarity:129/336 - (38%) Gaps:77/336 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 HP-----PQTYSRLFRPWDTQRQ-------------AATSAAP------------RTVKQEPEAI 41
            ||     |.:.|  ..|:..||.             ..||.:|            ....|:|.|.
Zfish    45 HPWKRAAPSSCS--LSPFGAQRNDSFSANSSFSLTGTTTSTSPFGNDYPVFQTSVANSSQDPSAQ 107

  Fly    42 TIKTELASS--------SFGHDCDGDFSSASSSASSSSNSSKSCYEEALNHSSYTRTSTPLLDAA 98
            ::......|        |..|..:..|.||.:..||...|..|.::...........:...|..:
Zfish   108 SVFISKVDSLQGIYPRMSVAHPYETWFKSAHAGISSGDGSGSSWWDVGTGWIDVQSANGAALQTS 172

  Fly    99 PH-PVFSHPQSSPLDTHAAATASLAP----PNQH-----APFLSAA-SDLYYAAAAAAAAAASTP 152
            .| |:..:....|..||:|.:||.:|    ..||     .|.|||. :|   ::..|.:|.....
Zfish   173 LHSPLSGYNSDYPSLTHSAFSASPSPHLLSSGQHLMDGFKPVLSATYTD---SSTGANSAVLGGS 234

  Fly   153 TAVPGFGMDPFTMGLME----------QEYARVMAEDAQL--KALNSRKQRPKKFKC--PNCDVA 203
            ..||..|....:.....          ||..|:....|.|  |.|:|         |  |.|...
Zfish   235 PVVPLAGSPRSSTRRYSGRATCDCPNCQEAERLGPAGASLRRKGLHS---------CHIPGCGKV 290

  Fly   204 FSNNGQLKGHIRIHTGERPFKCDVNTCGKTFTRNEELTRHKRIHTGLRPYPCSACGKKFGRRDHL 268
            :.....||.|:|.|||||||.|:...|||.|||::||.||.|.|||.:.:.|..|.|:|.|.|||
Zfish   291 YGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFSCPVCNKRFMRSDHL 355

  Fly   269 KKHMKTHMPQE 279
            .||:|||...|
Zfish   356 SKHVKTHSAGE 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 31/67 (46%)
C2H2 Zn finger 197..217 CDD:275368 7/21 (33%)
C2H2 Zn finger 225..247 CDD:275368 12/21 (57%)
zf-C2H2 253..275 CDD:395048 11/21 (52%)
C2H2 Zn finger 255..275 CDD:275368 11/19 (58%)
sp8aNP_998406.2 SP6-9_N 19..281 CDD:425402 52/240 (22%)
C2H2 Zn finger 285..304 CDD:275368 6/18 (33%)
zf-H2C2_2 296..323 CDD:463886 16/26 (62%)
C2H2 Zn finger 312..334 CDD:275368 12/21 (57%)
zf-H2C2_2 326..349 CDD:463886 11/22 (50%)
zf-C2H2 340..362 CDD:395048 11/21 (52%)
C2H2 Zn finger 342..362 CDD:275368 11/19 (58%)

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