DRSC/TRiP Functional Genomics Resources

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Protein Alignment hkb and btd

DIOPT Version :9

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_511100.1 Gene:btd / 31912 FlyBaseID:FBgn0000233 Length:644 Species:Drosophila melanogaster


Alignment Length:313 Identity:95/313 - (30%)
Similarity:123/313 - (39%) Gaps:94/313 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 IKTEL----ASSSFGHDCDGDFSSASSSASSSSNSSKSCYEEALNHSSYTRT-STPLLDAAP--- 99
            :|.||    |||:.....:....||.||||.|.:...|   .|.:.:|.:.: |||....||   
  Fly   125 MKLELPYPQASSTGTASPNSSIQSAPSSASVSPSIFPS---PAQSFASISASPSTPTTTLAPPTT 186

  Fly   100 --------HPVFSHPQSSPLDTHAAATAS-------------------------LAPPNQHAPFL 131
                    .|..|.|.||.....|||.|:                         |.|.....|:.
  Fly   187 AAAGALAGSPTSSSPSSSAASAAAAAAAAAAAAADLGAAAVASAAYGWNTAYSGLGPARSQFPYA 251

  Fly   132 SAASDLYYAAAAAAAAAAS------------TPTAVPGFGMDPFTMGLMEQEYARVMAEDAQLKA 184
            ..||| ||..|...:::|:            :..:.|||..|.             :|...||:.
  Fly   252 QYASD-YYGNAVGMSSSAAWFSHQERLYQPWSSQSYPGFNFDD-------------IAFQTQLQR 302

  Fly   185 LNSRKQRP--------------------KKFKC--PNCDVAFSNNGQLKGHIRIHTGERPFKCDV 227
            .:.|...|                    |:..|  |.|:..:.....||.|:|.|||||||.|  
  Fly   303 RSVRCTCPNCTNEMSGLPPIVGPDERGRKQHICHIPGCERLYGKASHLKTHLRWHTGERPFLC-- 365

  Fly   228 NTCGKTFTRNEELTRHKRIHTGLRPYPCSACGKKFGRRDHLKKHMKTHMPQER 280
            .||||.|:|::||.||.|.||..|||.|..|.|||.|.|||.||.|||...::
  Fly   366 LTCGKRFSRSDELQRHGRTHTNYRPYACPICSKKFSRSDHLSKHKKTHFKDKK 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 33/67 (49%)
zf-C2H2 195..217 CDD:278523 7/23 (30%)
C2H2 Zn finger 197..217 CDD:275368 7/21 (33%)
zf-H2C2_2 210..236 CDD:290200 17/25 (68%)
C2H2 Zn finger 225..247 CDD:275368 12/21 (57%)
zf-H2C2_2 239..264 CDD:290200 15/24 (63%)
C2H2 Zn finger 255..275 CDD:275368 12/19 (63%)
btdNP_511100.1 C2H2 Zn finger 338..357 CDD:275368 6/18 (33%)
zf-H2C2_2 349..374 CDD:290200 17/26 (65%)
C2H2 Zn finger 365..385 CDD:275368 12/21 (57%)
zf-H2C2_2 377..402 CDD:290200 15/24 (63%)
zf-C2H2 391..413 CDD:278523 13/21 (62%)
C2H2 Zn finger 393..413 CDD:275368 12/19 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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