DRSC/TRiP Functional Genomics Resources

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Protein Alignment hkb and Klf1

DIOPT Version :10

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:XP_006255316.1 Gene:Klf1 / 304666 RGDID:1309398 Length:381 Species:Rattus norvegicus


Alignment Length:226 Identity:67/226 - (29%)
Similarity:93/226 - (41%) Gaps:40/226 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 RTSTPLLDAAP----------HPVFSHPQSSPLDTHAAATASLAPPNQHAPF--LSAASDLY--- 138
            |..||....||          .|.||..::..............|....||:  ||....||   
  Rat   158 RPPTPEPFVAPVLAPGLAPKAQPAFSESRAVSAGGFFPRAGLAVPAAPSAPYGLLSGYPALYPAP 222

  Fly   139 -----YAAAAAAAAAASTPTAVPGF--GMDPFTMGLMEQEYARVMAEDAQL-----------KAL 185
                 :......||.::.|||.|.|  .:.|..:|  .:..|..:|.||.|           :.|
  Rat   223 QYQGHFQLFRGLAAPSAGPTAPPSFLNCLGPGAVG--TELGATAIAGDAGLSPGAAPPKRSRRTL 285

  Fly   186 NSRKQRPKKFKCPNCDVAFSNNGQLKGHIRIHT-----GERPFKCDVNTCGKTFTRNEELTRHKR 245
            ..::|.........|..:::.:..||.|:|.||     ||:|:.|..:.|...|.|::|||||.|
  Rat   286 AQKRQAAHTCGHEGCGKSYTKSSHLKAHLRTHTAPCPSGEKPYACSWDGCNWRFARSDELTRHYR 350

  Fly   246 IHTGLRPYPCSACGKKFGRRDHLKKHMKTHM 276
            .|||.||:.|..|.:.|.|.|||..|||.|:
  Rat   351 KHTGHRPFCCGLCPRAFSRSDHLALHMKRHL 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 27/70 (39%)
C2H2 Zn finger 197..217 CDD:275368 5/19 (26%)
C2H2 Zn finger 225..247 CDD:275368 10/21 (48%)
zf-C2H2 253..275 CDD:395048 10/21 (48%)
C2H2 Zn finger 255..275 CDD:275368 10/19 (53%)
Klf1XP_006255316.1 KLF1_N 28..293 CDD:409227 31/136 (23%)
COG5048 <297..>380 CDD:227381 35/82 (43%)
C2H2 Zn finger 298..317 CDD:275368 5/18 (28%)
C2H2 Zn finger 330..352 CDD:275368 10/21 (48%)
C2H2 Zn finger 360..380 CDD:275368 10/19 (53%)

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