DRSC/TRiP Functional Genomics Resources

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Protein Alignment hkb and Zic3

DIOPT Version :10

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_033601.2 Gene:Zic3 / 22773 MGIID:106676 Length:466 Species:Mus musculus


Alignment Length:380 Identity:85/380 - (22%)
Similarity:116/380 - (30%) Gaps:164/380 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DTQRQAATSAAPRTVKQEPEAITIKTELASSSFGHDCDGDFSSASSSASSSSNSSKSCYEEALNH 84
            |:...||.:||....|..|            :..|    |.||..|||.:...|.   |..||.|
Mouse    42 DSTHAAAAAAAAAAFKLSP------------ATAH----DLSSGQSSAFTPQGSG---YANALGH 87

  Fly    85 SSYTRTSTPLLDAAPHPVFSHPQSSPLDTHAAATASLAPPNQHAPFLSAASDLYYAAA------- 142
            .              |....|..:|.:.|:..|.::.....:...|....|.|..||:       
Mouse    88 H--------------HHHHHHHHASQVPTYGGAASAAFNSTRDFLFRQRGSGLSEAASGGGQHGL 138

  Fly   143 -AAAAAAASTPTAVPG-------------------------------------FG---------- 159
             |.:|::...|..:|.                                     ||          
Mouse   139 FAGSASSLHAPAGIPEPPSYLLFPGLHEQGAGHPSPTGHVDNNQVHLGLRGELFGRADPYRPVAS 203

  Fly   160 --MDPF--------------TMGL------------------MEQEYARVMAEDAQLKALNSRKQ 190
              .||:              .||:                  ::||.:....|:|||       .
Mouse   204 PRTDPYAASAQFPNYSPMNMNMGVNVAAHHGPGAFFRYMRQPIKQELSCKWIEEAQL-------S 261

  Fly   191 RPKKF---------------------------------KCPNCDVAFSNNGQLKGHIRIHTGERP 222
            ||||.                                 :||....:|....:|..|||:||||:|
Mouse   262 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKP 326

  Fly   223 FKCDVNTCGKTFTRNEELTRHKRIHTGLRPYPC--SACGKKFGRRDHLKKHMKTH 275
            |.|....|||.|.|:|.|..|||.|||.:|:.|  ..|.::|......||||..|
Mouse   327 FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 30/100 (30%)
C2H2 Zn finger 197..217 CDD:275368 7/19 (37%)
C2H2 Zn finger 225..247 CDD:275368 11/21 (52%)
zf-C2H2 253..275 CDD:395048 7/23 (30%)
C2H2 Zn finger 255..275 CDD:275368 7/21 (33%)
Zic3NP_033601.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 65..103 14/54 (26%)
zf_ZIC 244..289 CDD:436441 10/51 (20%)
Nuclear localization signal. /evidence=ECO:0000250 296..321 7/24 (29%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
SFP1 <323..407 CDD:227516 27/59 (46%)
C2H2 Zn finger 329..351 CDD:275368 11/21 (52%)
Nuclear localization signal. /evidence=ECO:0000250 329..351 11/21 (52%)
C2H2 Zn finger 359..381 CDD:275368 7/21 (33%)
C2H2 Zn finger 389..409 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 403..466
Blue background indicates that the domain is not in the aligned region.

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