DRSC/TRiP Functional Genomics Resources

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Protein Alignment hkb and egrh-1

DIOPT Version :10

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_510462.2 Gene:egrh-1 / 181580 WormBaseID:WBGene00007772 Length:461 Species:Caenorhabditis elegans


Alignment Length:372 Identity:95/372 - (25%)
Similarity:158/372 - (42%) Gaps:106/372 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTINLHPPQTYSRLFRPWDTQRQAATS--AAPRTV----------------KQEPEAITIKTEL 47
            |.|..|.|..:.|.....:.:::.:::|  |.|:.:                ||:||.:|:| ::
 Worm    92 MHTTTLMPAPSSSYKEPAYSSEQPSSSSDEAKPKELLGSNSFGVPRMTNGNSKQKPEELTLK-DI 155

  Fly    48 ASSSFGHDCDGDFSSASSSASS-----------SSNSSKSCYEE--------ALNH--------S 85
            ..||.|   .|...|...||:.           .:.::|:...|        .|||        |
 Worm   156 EISSTG---PGGVDSPGLSAAMFQFSPMVEHFLQNLTNKAGLPELVVDSKTAGLNHQEPSDLIKS 217

  Fly    86 SYTRTST---------------PLLDAAPHPVFS-----HPQSSP-----------LDTHAAAT- 118
            ...|.|:               |...:.|..:.|     ||||:.           .:|.|:.| 
 Worm   218 VQVRRSSIEDQKFSDVLHVPTLPRKTSEPSHLGSSLQNEHPQSNSRPSTVIPRVQRTNTSASLTR 282

  Fly   119 ----ASLAPPNQH-APFLSAAS----DLYYAAAAAAAAAASTPTAVPGFGMDPFTMGLMEQEY-- 172
                :|::|.:.| .|:.::||    ..:.:.:.:|:.|...|...|   ||.::....:.::  
 Worm   283 SMDHSSMSPISAHDDPYSNSASYSSLSTHTSFSDSASLAHFEPKTEP---MDDYSYNFSDNDFNS 344

  Fly   173 ARVMAEDAQLKALNSRKQRPKK-------FKCP--NCDVAFSNNGQLKGHIRIHTGERPFKCDVN 228
            ....:...:||.:..:|.:..|       :|||  .||..||.:.:|..|||||||::||:|.: 
 Worm   345 FEFSSTSEELKNIGCQKMKSSKMPLQDRPYKCPRDGCDRRFSRSDELTRHIRIHTGQKPFQCRI- 408

  Fly   229 TCGKTFTRNEELTRHKRIHTGLRPYPCSACGKKFGRRDHLKKHMKTH 275
             |.:.|:|::.||.|.|.|||.:|:.|..||:||.|.|..|:|.|.|
 Worm   409 -CMRAFSRSDHLTTHVRTHTGEKPFSCDICGRKFARSDERKRHTKVH 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 32/67 (48%)
C2H2 Zn finger 197..217 CDD:275368 10/21 (48%)
C2H2 Zn finger 225..247 CDD:275368 8/21 (38%)
zf-C2H2 253..275 CDD:395048 10/21 (48%)
C2H2 Zn finger 255..275 CDD:275368 10/19 (53%)
egrh-1NP_510462.2 zf-C2H2 374..398 CDD:395048 11/23 (48%)
C2H2 Zn finger 376..398 CDD:275368 10/21 (48%)
zf-H2C2_2 390..415 CDD:463886 13/26 (50%)
C2H2 Zn finger 406..426 CDD:275368 8/21 (38%)
zf-H2C2_2 418..443 CDD:463886 13/24 (54%)
C2H2 Zn finger 434..454 CDD:275368 10/19 (53%)

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