DRSC/TRiP Functional Genomics Resources

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Protein Alignment hkb and LOC1270324

DIOPT Version :10

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:XP_309008.5 Gene:LOC1270324 / 1270324 VectorBaseID:AGAMI1_013753 Length:509 Species:Anopheles gambiae


Alignment Length:294 Identity:68/294 - (23%)
Similarity:113/294 - (38%) Gaps:67/294 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PEAITIKTELASSSFGHDCDGD--FSSASSSASSSSNSSKSCYEEALNHSSYTRT---------- 90
            |.:.|:....|:::.|.....|  .|.|||:.||.::...|.....||..: |.|          
Mosquito    60 PASATVAAVAAAATAGVPVPTDRLRSPASSTGSSPTSVGSSPLYFYLNGRN-TGTEGAAVSGKDQ 123

  Fly    91 ----------STPLLDAAPHPV----------------------FSHPQSSPLDTHAAATASLAP 123
                      :.||.|.:|.|:                      ..:.|..|:.....|::|.:.
Mosquito   124 LAAGPLSPPHTPPLRDRSPCPLSGRGEVLGTGSTAAQRNSVIMKVQNQQVVPMQGETDASSSQSE 188

  Fly   124 PNQHAPFLSAASDLYYAAAAAAAAAASTPTAVPGFGMDPFTMGLMEQEYARVMAEDAQLKALNSR 188
            |:....|:....:.|.........|:.........|:|    ||....:.|.:.:|   :..|:|
Mosquito   189 PDTVEEFVCRWENCYCVFFKLEDLASHVTQKHAVIGLD----GLYYCRWERCLRQD---RGFNAR 246

  Fly   189 -----------KQRPKKFKCPNCDVAFSNNGQLKGHIRIHTGERPFKCDVNTCGKTFTRNEELTR 242
                       |::|  .:|..|...||....||.|:|.|:||:|:.|.|..|.|.::.:.:..:
Mosquito   247 YKMLVHVRTHTKEKP--HQCGKCGKCFSRAENLKIHLRSHSGEKPYVCPVEGCNKAYSNSSDRFK 309

  Fly   243 HKRIHTGLRPYPCS--ACGKKFGRRDHLKKHMKT 274
            |.|.|:..:||.|.  .|.|::.....|:||:||
Mosquito   310 HTRTHSNDKPYVCKVPGCNKRYTDPSSLRKHVKT 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 23/67 (34%)
C2H2 Zn finger 197..217 CDD:275368 8/19 (42%)
C2H2 Zn finger 225..247 CDD:275368 6/21 (29%)
zf-C2H2 253..275 CDD:395048 9/24 (38%)
C2H2 Zn finger 255..275 CDD:275368 8/22 (36%)
LOC1270324XP_309008.5 None

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