DRSC/TRiP Functional Genomics Resources

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Protein Alignment hkb and LOC110437822

DIOPT Version :9

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:XP_021331501.1 Gene:LOC110437822 / 110437822 -ID:- Length:472 Species:Danio rerio


Alignment Length:204 Identity:56/204 - (27%)
Similarity:82/204 - (40%) Gaps:41/204 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 PNQHAPFLSAASDLYYAAAAAAAAAASTPTAVPGFGMDPFTMGLMEQEYARVMAEDAQLKALNSR 188
            |:...|:..:..|..:...|:......:.:     |.:|||.....:.|......|..::..|  
Zfish   259 PSGDKPYACSQCDRRFKVGASLMLHMRSHS-----GDNPFTCVQCGKSYINKGNLDKHMRIHN-- 316

  Fly   189 KQRPKKFKCPNCDVAFSNNGQLKGHIRIHTGERPFKCDVNTCGKTFTRNEELTRHKRIHTGLRPY 253
              |....:|..|..:||:...||.|:|:|:||||..|  ..||::|...:.|..|..||.|.:|:
Zfish   317 --RWSHVRCQQCGKSFSHKQYLKIHMRVHSGERPHTC--GECGRSFAIKQNLHAHLSIHKGEKPF 377

  Fly   254 PCSACGKKFGRRDHLKKHMKTH--------------MPQERQLGPSIFV--------------PM 290
            ||..||::|..|..|.||.|.|              ..:||.|...|.|              ..
Zfish   378 PCQHCGRRFLHRSSLNKHTKAHSAEKCYVCYQCGKSYKEERNLSTHIRVHTGERPYGCARCGKSF 442

  Fly   291 YS--YLYGY 297
            ||  |||.:
Zfish   443 YSKAYLYSH 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 27/65 (42%)
zf-C2H2 195..217 CDD:278523 8/21 (38%)
C2H2 Zn finger 197..217 CDD:275368 8/19 (42%)
zf-H2C2_2 210..236 CDD:290200 13/25 (52%)
C2H2 Zn finger 225..247 CDD:275368 6/21 (29%)
zf-H2C2_2 239..264 CDD:290200 11/24 (46%)
C2H2 Zn finger 255..275 CDD:275368 9/19 (47%)
LOC110437822XP_021331501.1 C2H2 Zn finger 197..217 CDD:275368
C2H2 Zn finger 225..245 CDD:275368
C2H2 Zn finger 267..287 CDD:275368 2/19 (11%)
C2H2 Zn finger 295..315 CDD:275368 2/19 (11%)
zf-C2H2 322..343 CDD:306579 8/20 (40%)
C2H2 Zn finger 323..343 CDD:275368 8/19 (42%)
zf-H2C2_2 335..359 CDD:316026 12/25 (48%)
C2H2 Zn finger 351..371 CDD:275368 6/21 (29%)
C2H2 Zn finger 379..399 CDD:275368 9/19 (47%)
C2H2 Zn finger 407..427 CDD:275368 4/19 (21%)
C2H2 Zn finger 435..455 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1591573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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