DRSC/TRiP Functional Genomics Resources

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Protein Alignment hkb and znf229

DIOPT Version :10

Sequence 1:NP_524221.1 Gene:hkb / 40549 FlyBaseID:FBgn0261434 Length:297 Species:Drosophila melanogaster
Sequence 2:XP_004916266.1 Gene:znf229 / 100492389 XenbaseID:XB-GENE-6051225 Length:704 Species:Xenopus tropicalis


Alignment Length:112 Identity:45/112 - (40%)
Similarity:66/112 - (58%) Gaps:5/112 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 EYARVMAEDAQL-KALNSRKQ--RPKKFKCPNCDVAFSNNGQLKGHIRIHTGERPFKCDVNTCGK 232
            ::.|:.::..|| :..:|..|  ..|.::|..|:.:|.....||.|.|:||||||::|.:  |.|
 Frog   195 KHRRLHSQAQQLGRQAHSASQIISEKPYQCSYCEKSFKRTSDLKDHERVHTGERPYRCRI--CQK 257

  Fly   233 TFTRNEELTRHKRIHTGLRPYPCSACGKKFGRRDHLKKHMKTHMPQE 279
            .||::..||.|.|||||.||:.|..|||.|....:.|||.:||..|:
 Frog   258 CFTQSSVLTGHMRIHTGERPFHCDICGKTFNNSSNFKKHQRTHSVQD 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hkbNP_524221.1 COG5048 195..>261 CDD:227381 31/65 (48%)
C2H2 Zn finger 197..217 CDD:275368 7/19 (37%)
C2H2 Zn finger 225..247 CDD:275368 9/21 (43%)
zf-C2H2 253..275 CDD:395048 8/21 (38%)
C2H2 Zn finger 255..275 CDD:275368 8/19 (42%)
znf229XP_004916266.1 C2H2 Zn finger 96..116 CDD:275368
COG5048 <119..296 CDD:227381 40/102 (39%)
C2H2 Zn finger 124..144 CDD:275368
C2H2 Zn finger 152..172 CDD:275368
C2H2 Zn finger 180..200 CDD:275368 1/4 (25%)
C2H2 Zn finger 224..244 CDD:275368 7/19 (37%)
COG5048 248..697 CDD:227381 28/59 (47%)
C2H2 Zn finger 252..272 CDD:275368 9/21 (43%)
C2H2 Zn finger 280..300 CDD:275368 8/19 (42%)
C2H2 Zn finger 595..615 CDD:275368
C2H2 Zn finger 623..643 CDD:275368
C2H2 Zn finger 651..671 CDD:275368
C2H2 Zn finger 679..697 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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