| Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_848739.1 | Gene: | Fbxl2 / 72179 | MGIID: | 1919429 | Length: | 423 | Species: | Mus musculus |
| Alignment Length: | 361 | Identity: | 84/361 - (23%) |
|---|---|---|---|
| Similarity: | 153/361 - (42%) | Gaps: | 76/361 - (21%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 240 ERLSDEILLDIFKWLPKKTLLRMATVCRRFNRCSRDETLWTRLDL-GLRT-IRPGALEQIVRR-G 301
Fly 302 VLVIRLAQTSIQEPAFAPYTEVFRTRLQYLDLSMASITRSSLLTLLSHCRQLKKISLEN-IELDD 365
Fly 366 DICAEIAK-NEALEAVNLTMASGLTSNSVRLMMESLTSLSSLNISWTD-LSADAVTALV------ 422
Fly 423 ----------------THISPN---LIRLNIAGCRRVLFDSHVATLQKRCPQLLELDLSDCNSLT 468
Fly 469 PTVITAI-MKFKMLEYLSVSRC-------YLIPATKFIELKSMPSLTYLDIFGMLSDTAMEVLEK 525
Fly 526 QLPKMGINKFIHSS---------VSRPTVGTRRTSI 552 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 15/43 (35%) |
| leucine-rich repeat | 302..327 | CDD:275381 | 1/24 (4%) | ||
| AMN1 | 309..480 | CDD:187754 | 43/199 (22%) | ||
| leucine-rich repeat | 328..352 | CDD:275381 | 5/23 (22%) | ||
| leucine-rich repeat | 353..376 | CDD:275381 | 3/24 (13%) | ||
| leucine-rich repeat | 377..402 | CDD:275381 | 6/24 (25%) | ||
| leucine-rich repeat | 403..428 | CDD:275381 | 11/47 (23%) | ||
| leucine-rich repeat | 429..455 | CDD:275381 | 8/25 (32%) | ||
| leucine-rich repeat | 456..480 | CDD:275381 | 9/24 (38%) | ||
| leucine-rich repeat | 481..500 | CDD:275381 | 5/25 (20%) | ||
| leucine-rich repeat | 506..529 | CDD:275381 | 3/22 (14%) | ||
| Fbxl2 | NP_848739.1 | F-box-like | 15..57 | CDD:289689 | 15/41 (37%) |
| leucine-rich repeat | 52..79 | CDD:275381 | 9/26 (35%) | ||
| LRR 1 | 61..87 | 6/48 (13%) | |||
| AMN1 | <76..223 | CDD:187754 | 33/170 (19%) | ||
| leucine-rich repeat | 80..99 | CDD:275381 | 4/41 (10%) | ||
| Interaction with Calmodulin. /evidence=ECO:0000269|PubMed:21343341 | 80..90 | 1/32 (3%) | |||
| LRR 2 | 88..113 | 7/24 (29%) | |||
| leucine-rich repeat | 106..131 | CDD:275381 | 3/24 (13%) | ||
| LRR 3 | 114..139 | 4/24 (17%) | |||
| leucine-rich repeat | 132..157 | CDD:275381 | 6/24 (25%) | ||
| LRR 4 | 140..165 | 6/24 (25%) | |||
| leucine-rich repeat | 158..183 | CDD:275381 | 9/24 (38%) | ||
| LRR 5 | 166..191 | 4/24 (17%) | |||
| AMN1 | 168..367 | CDD:187754 | 40/183 (22%) | ||
| leucine-rich repeat | 184..209 | CDD:275381 | 2/24 (8%) | ||
| LRR 6 | 192..217 | 5/24 (21%) | |||
| leucine-rich repeat | 210..235 | CDD:275381 | 8/25 (32%) | ||
| LRR 7 | 218..243 | 8/25 (32%) | |||
| leucine-rich repeat | 236..261 | CDD:275381 | 9/24 (38%) | ||
| LRR 8 | 244..269 | 7/24 (29%) | |||
| leucine-rich repeat | 262..287 | CDD:275381 | 5/24 (21%) | ||
| LRR 9 | 270..295 | 6/28 (21%) | |||
| leucine-rich repeat | 288..313 | CDD:275381 | 5/28 (18%) | ||
| LRR 10 | 296..321 | 4/24 (17%) | |||
| leucine-rich repeat | 314..336 | CDD:275381 | 2/21 (10%) | ||
| LRR 11 | 322..350 | 4/24 (17%) | |||
| leucine-rich repeat | 343..362 | CDD:275381 | 0/3 (0%) | ||
| LRR 12 | 351..375 | ||||
| LRR 13 | 376..401 | ||||
| CAAX motif | 420..423 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C167843143 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.840 | |||||