Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001347270.1 | Gene: | Fbxl3 / 50789 | MGIID: | 1354702 | Length: | 428 | Species: | Mus musculus |
Alignment Length: | 306 | Identity: | 63/306 - (20%) |
---|---|---|---|
Similarity: | 116/306 - (37%) | Gaps: | 70/306 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 242 LSDEILLDIFKWLPKKTLLRMATVCRRFNRCSRDETLWTRLDLG--------LRTIRPGALEQIV 298
Fly 299 RRGVLVIRLAQTSIQEPAFAPYTEVFRTRLQYLDLSMASITRSS-----LLTLLSHCRQLKKISL 358
Fly 359 ENIELDDDICAEIAKNEALEAVNLTMASGLTSNSVRLMMESLTSLSSLNISWTDLSADAVTALVT 423
Fly 424 HISPNLIRLNIAGCRRVLFDSHVATLQKRCPQLLELDLSDCNSLTPTVITAIM--KFKMLEYLSV 486
Fly 487 SRCYLIPATKFIELKSMPSLTYLDIFGMLSDTAMEVLEKQLPKMGI 532 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 13/41 (32%) |
leucine-rich repeat | 302..327 | CDD:275381 | 0/24 (0%) | ||
AMN1 | 309..480 | CDD:187754 | 36/177 (20%) | ||
leucine-rich repeat | 328..352 | CDD:275381 | 8/28 (29%) | ||
leucine-rich repeat | 353..376 | CDD:275381 | 5/22 (23%) | ||
leucine-rich repeat | 377..402 | CDD:275381 | 1/24 (4%) | ||
leucine-rich repeat | 403..428 | CDD:275381 | 9/24 (38%) | ||
leucine-rich repeat | 429..455 | CDD:275381 | 5/25 (20%) | ||
leucine-rich repeat | 456..480 | CDD:275381 | 7/25 (28%) | ||
leucine-rich repeat | 481..500 | CDD:275381 | 3/18 (17%) | ||
leucine-rich repeat | 506..529 | CDD:275381 | 3/22 (14%) | ||
Fbxl3 | NP_001347270.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..33 | ||
F-box-like | 36..77 | CDD:315592 | 12/37 (32%) | ||
LRR 1 | 119..146 | 8/29 (28%) | |||
leucine-rich repeat | 174..199 | CDD:275381 | 9/24 (38%) | ||
LRR 2 | 181..207 | 6/25 (24%) | |||
leucine-rich repeat | 200..225 | CDD:275381 | 5/25 (20%) | ||
LRR 3 | 208..233 | 7/26 (27%) | |||
LRR 4 | 234..259 | 6/35 (17%) | |||
leucine-rich repeat | 252..286 | CDD:275381 | 7/47 (15%) | ||
leucine-rich repeat | 287..333 | CDD:275381 | 0/3 (0%) | ||
LRR 5 | 316..341 | ||||
leucine-rich repeat | 334..360 | CDD:275381 | |||
LRR 6 | 343..368 | ||||
leucine-rich repeat | 361..383 | CDD:275381 | |||
LRR 7 | 369..394 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167843130 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR16134 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |