Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012816107.1 | Gene: | fbxl5 / 496483 | XenbaseID: | XB-GENE-968565 | Length: | 662 | Species: | Xenopus tropicalis |
Alignment Length: | 464 | Identity: | 83/464 - (17%) |
---|---|---|---|
Similarity: | 144/464 - (31%) | Gaps: | 186/464 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 242 LSDEILLDIFKWLPKKTLLRMATVCRRFNRCSRDETLW------------------TRLD----- 283
Fly 284 --LGLRTIRPGALEQ---------------------------------------IVRRGVLVIRL 307
Fly 308 AQTSIQEPAFAPYTEVFRTRLQY------LDLSMASITRSSLL-TLLSHCRQLKKISLENIELDD 365
Fly 366 DICAEIAKNEALEAVNLTMASGL--------------TSNSVRLMME--SLTSLSSLNISWTDLS 414
Fly 415 ADAVTAL-----------------------VTHISPNLIRLNIAGCRR--------VLFDSH--- 445
Fly 446 ---------------------------VATLQKR----CPQLLELDLSDCNSLTPTVITAIMKFK 479
Fly 480 MLEYLSVSRCYLIPATKFIELK---SMPSLTYLDIFGMLSDT--AMEVLEKQLPKMGINKFIH-S 538
Fly 539 SVSRPTVGT 547 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 15/66 (23%) |
leucine-rich repeat | 302..327 | CDD:275381 | 7/24 (29%) | ||
AMN1 | 309..480 | CDD:187754 | 44/258 (17%) | ||
leucine-rich repeat | 328..352 | CDD:275381 | 8/30 (27%) | ||
leucine-rich repeat | 353..376 | CDD:275381 | 5/22 (23%) | ||
leucine-rich repeat | 377..402 | CDD:275381 | 8/40 (20%) | ||
leucine-rich repeat | 403..428 | CDD:275381 | 4/47 (9%) | ||
leucine-rich repeat | 429..455 | CDD:275381 | 9/67 (13%) | ||
leucine-rich repeat | 456..480 | CDD:275381 | 2/23 (9%) | ||
leucine-rich repeat | 481..500 | CDD:275381 | 6/18 (33%) | ||
leucine-rich repeat | 506..529 | CDD:275381 | 6/24 (25%) | ||
fbxl5 | XP_012816107.1 | Hr_FBXL5 | 7..160 | CDD:213984 | |
F-box-like | 205..249 | CDD:372399 | 12/40 (30%) | ||
leucine-rich repeat | 332..357 | CDD:275381 | 9/30 (30%) | ||
AMN1 | <340..444 | CDD:187754 | 26/117 (22%) | ||
leucine-rich repeat | 358..383 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 384..438 | CDD:275381 | 12/61 (20%) | ||
leucine-rich repeat | 439..500 | CDD:275381 | 8/60 (13%) | ||
leucine-rich repeat | 511..559 | CDD:275381 | 5/47 (11%) | ||
AMN1 | 556..>625 | CDD:187754 | 19/82 (23%) | ||
leucine-rich repeat | 571..598 | CDD:275381 | 7/26 (27%) | ||
leucine-rich repeat | 599..624 | CDD:275381 | 6/24 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |