Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001252264.2 | Gene: | gadr-5 / 4927064 | WormBaseID: | WBGene00045058 | Length: | 915 | Species: | Caenorhabditis elegans |
Alignment Length: | 327 | Identity: | 82/327 - (25%) |
---|---|---|---|
Similarity: | 125/327 - (38%) | Gaps: | 88/327 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 208 TNITTRIVAADSFFVFRTPAMSAHINSGINYFERLSDEILLDIFKWLPKKTLLRMATVCRRFNRC 272
Fly 273 SRDETLWTRLDLGLRTIRPGALEQIVRRGVLVIRLAQTSIQEPAFAPYTEVFRTRLQYLDLSMAS 337
Fly 338 ITRSSLLTLLSHCRQLKKISLENIELDDDICAEIAKNEALEAVNLTMASGLTSNSVRLMMESLTS 402
Fly 403 LSSLNISWTDLSADAVTALVTHISPNLIRLNIAGCRRVLFDSHVATLQ--KRCPQLLELDLSDCN 465
Fly 466 SLTPTVITAIMKFKMLEYLSVSR----CYLIPATKFIELKS-MPSLTYLDIFGM-LSDTAMEVLE 524
Fly 525 KQ 526 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 6/44 (14%) |
leucine-rich repeat | 302..327 | CDD:275381 | 5/24 (21%) | ||
AMN1 | 309..480 | CDD:187754 | 45/172 (26%) | ||
leucine-rich repeat | 328..352 | CDD:275381 | 3/23 (13%) | ||
leucine-rich repeat | 353..376 | CDD:275381 | 6/22 (27%) | ||
leucine-rich repeat | 377..402 | CDD:275381 | 7/24 (29%) | ||
leucine-rich repeat | 403..428 | CDD:275381 | 8/24 (33%) | ||
leucine-rich repeat | 429..455 | CDD:275381 | 8/27 (30%) | ||
leucine-rich repeat | 456..480 | CDD:275381 | 5/23 (22%) | ||
leucine-rich repeat | 481..500 | CDD:275381 | 6/22 (27%) | ||
leucine-rich repeat | 506..529 | CDD:275381 | 8/22 (36%) | ||
gadr-5 | NP_001252264.2 | MFS | <15..201 | CDD:119392 | |
LRR | <311..514 | CDD:227223 | 54/189 (29%) | ||
leucine-rich repeat | 348..372 | CDD:275382 | 8/24 (33%) | ||
LRR_4 | 371..>402 | CDD:289563 | 11/38 (29%) | ||
leucine-rich repeat | 373..396 | CDD:275382 | 8/29 (28%) | ||
leucine-rich repeat | 397..419 | CDD:275380 | 4/21 (19%) | ||
leucine-rich repeat | 420..449 | CDD:275380 | 7/28 (25%) | ||
leucine-rich repeat | 450..473 | CDD:275380 | 8/22 (36%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160162730 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |