| Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_651593.1 | Gene: | CG5003 / 43344 | FlyBaseID: | FBgn0039554 | Length: | 713 | Species: | Drosophila melanogaster |
| Alignment Length: | 257 | Identity: | 61/257 - (23%) |
|---|---|---|---|
| Similarity: | 104/257 - (40%) | Gaps: | 44/257 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 244 DEILLDIFKWLPKKTLLRMATVCRRFNRCSRDETLWTRLDLGLRTIRPGALEQIVRRG---VLVI 305
Fly 306 RL-AQTSIQEPA--FAPYTEVFRTRLQYLDLSMASITRSSLLTLLSHCRQLKKISLENIELDDD- 366
Fly 367 --ICAEIAKNEALEAVNLTMASGLTSNSVRLMME-SLTSLSSLNI---SWTDLSADAVTALVTHI 425
Fly 426 S--PNLIRLNIAGCRR----VLFDSHVATLQKRCPQLLELDLSDCNSLTPTVITAIMKFKML 481 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 10/39 (26%) |
| leucine-rich repeat | 302..327 | CDD:275381 | 6/27 (22%) | ||
| AMN1 | 309..480 | CDD:187754 | 41/185 (22%) | ||
| leucine-rich repeat | 328..352 | CDD:275381 | 1/23 (4%) | ||
| leucine-rich repeat | 353..376 | CDD:275381 | 8/25 (32%) | ||
| leucine-rich repeat | 377..402 | CDD:275381 | 6/25 (24%) | ||
| leucine-rich repeat | 403..428 | CDD:275381 | 6/29 (21%) | ||
| leucine-rich repeat | 429..455 | CDD:275381 | 8/29 (28%) | ||
| leucine-rich repeat | 456..480 | CDD:275381 | 5/23 (22%) | ||
| leucine-rich repeat | 481..500 | CDD:275381 | 1/1 (100%) | ||
| leucine-rich repeat | 506..529 | CDD:275381 | |||
| CG5003 | NP_651593.1 | F-box | 68..114 | CDD:279040 | 10/39 (26%) |
| leucine-rich repeat | 610..635 | CDD:275381 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C45457993 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | P | PTHR16134 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.940 | |||||