| Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_650560.1 | Gene: | CG14891 / 42013 | FlyBaseID: | FBgn0038445 | Length: | 495 | Species: | Drosophila melanogaster |
| Alignment Length: | 376 | Identity: | 91/376 - (24%) |
|---|---|---|---|
| Similarity: | 138/376 - (36%) | Gaps: | 85/376 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 242 LSDEILLDIFKWLPKKTLLRMATVCRRFNRCSRDETLWTRLDLGLRTIRPGALEQIVRRGVLV-- 304
Fly 305 --IRLAQTSIQEPAFAPYTEVFRTRLQYLDLSMASITRSSLLTL---LSHCRQL----------K 354
Fly 355 KISLENIELDDDICAEIAKNEALEAVNLTMASGLTSNSVR----LMMESL----TSLSSLNIS-W 410
Fly 411 TDLSADAV--TALVTHISPNLIRLNIAGCRRVLFDSHV-ATLQKRCPQLLELDLSD------CNS 466
Fly 467 LTPTVITAIMKFKMLEYLSVSRCYLIPATKFIELKSMPSLTYLDIFGMLSDTAME---------- 521
Fly 522 ---VLEKQ----LPKMGINK-----FIHSS----VSRPTVGTRRTSIWGLR 556 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 8/41 (20%) |
| leucine-rich repeat | 302..327 | CDD:275381 | 6/28 (21%) | ||
| AMN1 | 309..480 | CDD:187754 | 50/201 (25%) | ||
| leucine-rich repeat | 328..352 | CDD:275381 | 7/26 (27%) | ||
| leucine-rich repeat | 353..376 | CDD:275381 | 8/32 (25%) | ||
| leucine-rich repeat | 377..402 | CDD:275381 | 8/32 (25%) | ||
| leucine-rich repeat | 403..428 | CDD:275381 | 9/27 (33%) | ||
| leucine-rich repeat | 429..455 | CDD:275381 | 6/26 (23%) | ||
| leucine-rich repeat | 456..480 | CDD:275381 | 6/29 (21%) | ||
| leucine-rich repeat | 481..500 | CDD:275381 | 5/18 (28%) | ||
| leucine-rich repeat | 506..529 | CDD:275381 | 11/39 (28%) | ||
| CG14891 | NP_650560.1 | RRM_6 | 25..91 | CDD:290958 | |
| AMN1 | <199..352 | CDD:187754 | 45/170 (26%) | ||
| leucine-rich repeat | 211..237 | CDD:275381 | 5/25 (20%) | ||
| leucine-rich repeat | 239..262 | CDD:275381 | 9/33 (27%) | ||
| leucine-rich repeat | 263..285 | CDD:275381 | 5/21 (24%) | ||
| leucine-rich repeat | 286..338 | CDD:275381 | 15/55 (27%) | ||
| leucine-rich repeat | 339..387 | CDD:275381 | 12/51 (24%) | ||
| leucine-rich repeat | 388..415 | CDD:275381 | 8/26 (31%) | ||
| leucine-rich repeat | 416..439 | CDD:275381 | 6/22 (27%) | ||
| leucine-rich repeat | 440..465 | CDD:275381 | 5/24 (21%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C45453477 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.930 | |||||