Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_729732.1 | Gene: | CG32085 / 39311 | FlyBaseID: | FBgn0052085 | Length: | 666 | Species: | Drosophila melanogaster |
Alignment Length: | 587 | Identity: | 131/587 - (22%) |
---|---|---|---|
Similarity: | 218/587 - (37%) | Gaps: | 138/587 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 47 PSSPSALTFEALEEMGIGMLDSEESSSSALSAIALAVSATSDDNSNETTPCASVSRMAHQLQHTQ 111
Fly 112 RLSLGST---GDITL--DSPAVEDS----LSMSRQSAEKLQILAQAKRSSLGSEGSG--NSN--- 162
Fly 163 --SPSKRLRNPLA----------AVTCNNQIDGTASLNFQPSTSRLAQVRQAKKPSTTNITTRIV 215
Fly 216 AADSFFVFRTPAMSAHI-----NSGINYFE-------------------RLSDEILLDIFKWLPK 256
Fly 257 KTLLRMATVCRRF-NRCSRDETLWTRL--DLGLRTIR--PGA-----LEQIVRRGVLVIRLAQTS 311
Fly 312 IQEPAFAPYTEVFRTR-LQYLDLSMASITRSSLLTLLSHCRQLKKISLENIELDDDICAEIAKNE 375
Fly 376 ALEA----------VNLTMAS--GLTSNSVRLMMESLTSL-----------------------SS 405
Fly 406 LNI----SWTDLSADAVTALVTHISPNLIRLNIAGCRRVLFDSHVATLQKRCPQLLELDLSDCNS 466
Fly 467 LTPTVITAI-MKFKMLEYLSVSRCYLIPATKFIELKSMPSLTYLDI--------FGMLSDTAMEV 522
Fly 523 LE 524 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 10/66 (15%) |
leucine-rich repeat | 302..327 | CDD:275381 | 2/24 (8%) | ||
AMN1 | 309..480 | CDD:187754 | 47/211 (22%) | ||
leucine-rich repeat | 328..352 | CDD:275381 | 9/23 (39%) | ||
leucine-rich repeat | 353..376 | CDD:275381 | 4/22 (18%) | ||
leucine-rich repeat | 377..402 | CDD:275381 | 7/36 (19%) | ||
leucine-rich repeat | 403..428 | CDD:275381 | 8/51 (16%) | ||
leucine-rich repeat | 429..455 | CDD:275381 | 7/25 (28%) | ||
leucine-rich repeat | 456..480 | CDD:275381 | 8/24 (33%) | ||
leucine-rich repeat | 481..500 | CDD:275381 | 6/18 (33%) | ||
leucine-rich repeat | 506..529 | CDD:275381 | 7/27 (26%) | ||
CG32085 | NP_729732.1 | leucine-rich repeat | 382..406 | CDD:275381 | 9/23 (39%) |
AMN1 | 383..600 | CDD:187754 | 57/230 (25%) | ||
leucine-rich repeat | 431..456 | CDD:275381 | 5/24 (21%) | ||
leucine-rich repeat | 457..482 | CDD:275381 | 1/24 (4%) | ||
leucine-rich repeat | 483..508 | CDD:275381 | 6/25 (24%) | ||
leucine-rich repeat | 509..534 | CDD:275381 | 7/25 (28%) | ||
leucine-rich repeat | 535..560 | CDD:275381 | 8/24 (33%) | ||
leucine-rich repeat | 561..585 | CDD:275381 | 7/23 (30%) | ||
leucine-rich repeat | 586..610 | CDD:275381 | 6/23 (26%) | ||
leucine-rich repeat | 636..661 | CDD:275381 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45457968 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |