Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001343666.1 | Gene: | Y55F3C.9 / 3896809 | WormBaseID: | WBGene00044459 | Length: | 732 | Species: | Caenorhabditis elegans |
Alignment Length: | 273 | Identity: | 51/273 - (18%) |
---|---|---|---|
Similarity: | 110/273 - (40%) | Gaps: | 68/273 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 302 VLVIRLAQTSIQEPAFAPY--------------TEVFRTRLQYLDLSMASITRSSLLTLLSH--- 349
Fly 350 --CRQLKKISLENIEL-----------DDDICAEIAKNEALEAVNLTMASGLTSNSVRLMM---- 397
Fly 398 ------ESLTSLSSLNIS---------WTDLSADAVTALVTHISPNLIRLNIAGCRRVLFDSHVA 447
Fly 448 TLQKRCPQLLELDLSDCNSLTPTVITAIMKFKMLEYLSVSRCYLIPATKFIELKSMPSLTYLDIF 512
Fly 513 GMLSDTAMEVLEK 525 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | |
leucine-rich repeat | 302..327 | CDD:275381 | 7/38 (18%) | ||
AMN1 | 309..480 | CDD:187754 | 40/219 (18%) | ||
leucine-rich repeat | 328..352 | CDD:275381 | 2/28 (7%) | ||
leucine-rich repeat | 353..376 | CDD:275381 | 5/33 (15%) | ||
leucine-rich repeat | 377..402 | CDD:275381 | 3/34 (9%) | ||
leucine-rich repeat | 403..428 | CDD:275381 | 11/33 (33%) | ||
leucine-rich repeat | 429..455 | CDD:275381 | 4/25 (16%) | ||
leucine-rich repeat | 456..480 | CDD:275381 | 7/23 (30%) | ||
leucine-rich repeat | 481..500 | CDD:275381 | 3/18 (17%) | ||
leucine-rich repeat | 506..529 | CDD:275381 | 5/20 (25%) | ||
Y55F3C.9 | NP_001343666.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160162742 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |