Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_956400.1 | Gene: | fbxl2 / 378737 | ZFINID: | ZDB-GENE-030925-12 | Length: | 432 | Species: | Danio rerio |
Alignment Length: | 347 | Identity: | 79/347 - (22%) |
---|---|---|---|
Similarity: | 155/347 - (44%) | Gaps: | 71/347 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 224 RTPAMSAHINSGINYFERLSDEILLDIFKWLPKKTLLRMATVCRRFNRCSRDETLWTRLDL-GLR 287
Fly 288 T-IRPGALEQIVRR--GVLVIRLAQTSIQEPAFAPYTEVFRTRLQYLDLSMASITRSSLLTLLSH 349
Fly 350 CRQLKKISLEN-IELDDDICAEIAK-NEALEAVNLTMASGLTSNSVRLMMESLTSLSSLNISWTD 412
Fly 413 -LSADAVTAL----------------------VTHIS---PNLIRLNIAGCRRVLFDSHVATLQK 451
Fly 452 RCPQLLELDLSDCNSLTPTVITAI-MKFKMLEYLSVSRC-------YLIPATKFIELKSMPSLTY 508
Fly 509 LDIFGMLSDTAMEVLEKQLPKM 530 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 15/44 (34%) |
leucine-rich repeat | 302..327 | CDD:275381 | 3/24 (13%) | ||
AMN1 | 309..480 | CDD:187754 | 40/199 (20%) | ||
leucine-rich repeat | 328..352 | CDD:275381 | 4/23 (17%) | ||
leucine-rich repeat | 353..376 | CDD:275381 | 4/24 (17%) | ||
leucine-rich repeat | 377..402 | CDD:275381 | 5/24 (21%) | ||
leucine-rich repeat | 403..428 | CDD:275381 | 10/50 (20%) | ||
leucine-rich repeat | 429..455 | CDD:275381 | 7/25 (28%) | ||
leucine-rich repeat | 456..480 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 481..500 | CDD:275381 | 5/25 (20%) | ||
leucine-rich repeat | 506..529 | CDD:275381 | 3/22 (14%) | ||
fbxl2 | NP_956400.1 | F-box-like | 24..66 | CDD:289689 | 15/41 (37%) |
leucine-rich repeat | 61..88 | CDD:275381 | 8/26 (31%) | ||
AMN1 | 63..284 | CDD:187754 | 53/245 (22%) | ||
leucine-rich repeat | 89..108 | CDD:275381 | 5/38 (13%) | ||
leucine-rich repeat | 115..140 | CDD:275381 | 4/24 (17%) | ||
leucine-rich repeat | 141..166 | CDD:275381 | 5/24 (21%) | ||
leucine-rich repeat | 167..192 | CDD:275381 | 9/24 (38%) | ||
leucine-rich repeat | 193..218 | CDD:275381 | 1/24 (4%) | ||
AMN1 | 212..390 | CDD:187754 | 25/117 (21%) | ||
leucine-rich repeat | 219..244 | CDD:275381 | 7/25 (28%) | ||
leucine-rich repeat | 245..270 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 271..296 | CDD:275381 | 5/24 (21%) | ||
leucine-rich repeat | 297..322 | CDD:275381 | 4/28 (14%) | ||
leucine-rich repeat | 323..351 | CDD:275381 | 0/1 (0%) | ||
leucine-rich repeat | 352..376 | CDD:275381 | |||
leucine-rich repeat | 377..402 | CDD:275381 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170588073 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |