| Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038938600.1 | Gene: | Fbxl2 / 363156 | RGDID: | 1562243 | Length: | 439 | Species: | Rattus norvegicus |
| Alignment Length: | 347 | Identity: | 79/347 - (22%) |
|---|---|---|---|
| Similarity: | 147/347 - (42%) | Gaps: | 68/347 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 250 IFKWLPKKTLLRMATVCRRFNRCSRDETLWTRLDL-GLRT-IRPGALEQIVRR-GVLVIRLAQTS 311
Fly 312 IQEPAFAPYTEVFRTRLQYLDLSMASITRSSLLTLLSHCRQLKKISLEN-IELDDDICAEIAK-N 374
Fly 375 EALEAVNLTMASGLTSNSVRLMMESLTSLSSLNISWTD-LSADAVTALV---------------- 422
Fly 423 ------THISPN---LIRLNIAGCRRVLFDSHVATLQKRCPQLLELDLSDCNSLTPTVITAI-MK 477
Fly 478 FKMLEYLSVSRC-YLIPATKFIELKSMPSLTYLDI--FGMLSDTAMEVLEKQLPKMGINKFIHSS 539
Fly 540 ---------VSRPTVGTRRTSI 552 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 11/33 (33%) |
| leucine-rich repeat | 302..327 | CDD:275381 | 1/24 (4%) | ||
| AMN1 | 309..480 | CDD:187754 | 43/199 (22%) | ||
| leucine-rich repeat | 328..352 | CDD:275381 | 5/23 (22%) | ||
| leucine-rich repeat | 353..376 | CDD:275381 | 3/24 (13%) | ||
| leucine-rich repeat | 377..402 | CDD:275381 | 6/24 (25%) | ||
| leucine-rich repeat | 403..428 | CDD:275381 | 11/47 (23%) | ||
| leucine-rich repeat | 429..455 | CDD:275381 | 8/25 (32%) | ||
| leucine-rich repeat | 456..480 | CDD:275381 | 9/24 (38%) | ||
| leucine-rich repeat | 481..500 | CDD:275381 | 6/19 (32%) | ||
| leucine-rich repeat | 506..529 | CDD:275381 | 4/24 (17%) | ||
| Fbxl2 | XP_038938600.1 | F-box-like | <38..72 | CDD:403981 | 11/32 (34%) |
| leucine-rich repeat | 68..95 | CDD:275381 | 9/26 (35%) | ||
| AMN1 | <92..239 | CDD:187754 | 33/170 (19%) | ||
| leucine-rich repeat | 96..115 | CDD:275381 | 4/41 (10%) | ||
| leucine-rich repeat | 122..147 | CDD:275381 | 3/24 (13%) | ||
| leucine-rich repeat | 148..173 | CDD:275381 | 6/24 (25%) | ||
| leucine-rich repeat | 174..199 | CDD:275381 | 9/24 (38%) | ||
| AMN1 | 184..383 | CDD:187754 | 39/179 (22%) | ||
| leucine-rich repeat | 200..225 | CDD:275381 | 2/24 (8%) | ||
| leucine-rich repeat | 226..251 | CDD:275381 | 8/25 (32%) | ||
| leucine-rich repeat | 252..277 | CDD:275381 | 9/24 (38%) | ||
| leucine-rich repeat | 278..303 | CDD:275381 | 6/24 (25%) | ||
| leucine-rich repeat | 304..329 | CDD:275381 | 4/24 (17%) | ||
| leucine-rich repeat | 330..352 | CDD:275381 | 2/21 (10%) | ||
| leucine-rich repeat | 359..378 | CDD:275381 | 0/3 (0%) | ||
| leucine-rich repeat | 384..409 | CDD:275381 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166346649 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.840 | |||||