Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001097271.1 | Gene: | CG9003 / 36244 | FlyBaseID: | FBgn0033639 | Length: | 651 | Species: | Drosophila melanogaster |
Alignment Length: | 565 | Identity: | 126/565 - (22%) |
---|---|---|---|
Similarity: | 225/565 - (39%) | Gaps: | 106/565 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 SSRKHRGSENMENLCPVTRKRSTNKNHVSVVGALVSTTKSSHYEHPSSPSALTFEALEEMGIGML 66
Fly 67 -DSEESSSSALSAIALAVSATSDDNSNETTPCASVSRMAHQLQHTQRLSLGSTGDITLDSPAVED 130
Fly 131 SLSMSRQSAEKLQILAQAKRSSLGSEGSGNSNSPSKRLRNPLAAVTCNNQIDGTAS--LNFQPST 193
Fly 194 SRLAQVRQAKKPS---TTNITTRIVAADSFFVFRTPAMSAHINS-------------GINYFERL 242
Fly 243 SDEILLDIFKWLPKKTLLRMATVCRRFNRCSRDETLWTRLDL--GLRTIRPGALEQIVRRGVLVI 305
Fly 306 RLAQTSIQEPAFAPYTEVFRTRLQYLDL-SMASITRSSLLTLLSHCRQLKKISLENIELDDDICA 369
Fly 370 EIAKN--EALEAVNLTMASGLTSNSVRLMMESLTSLSSLNISWTDL-SADAVTALVTHISPNLIR 431
Fly 432 LNIAGCRRVLFDSHVATLQKRCPQLLELDLSDCNSLTPTVITAI-MKFKMLEYLSVSRCYLIPAT 495
Fly 496 KFIELKSMPS-LTYLDIFGM--LSDTAMEVLE---KQLPKMGINK 534 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 14/44 (32%) |
leucine-rich repeat | 302..327 | CDD:275381 | 1/24 (4%) | ||
AMN1 | 309..480 | CDD:187754 | 44/175 (25%) | ||
leucine-rich repeat | 328..352 | CDD:275381 | 9/24 (38%) | ||
leucine-rich repeat | 353..376 | CDD:275381 | 3/24 (13%) | ||
leucine-rich repeat | 377..402 | CDD:275381 | 8/24 (33%) | ||
leucine-rich repeat | 403..428 | CDD:275381 | 9/25 (36%) | ||
leucine-rich repeat | 429..455 | CDD:275381 | 7/25 (28%) | ||
leucine-rich repeat | 456..480 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 481..500 | CDD:275381 | 5/18 (28%) | ||
leucine-rich repeat | 506..529 | CDD:275381 | 7/27 (26%) | ||
CG9003 | NP_001097271.1 | F-box-like | 240..285 | CDD:289689 | 14/44 (32%) |
leucine-rich repeat | 280..307 | CDD:275381 | 8/49 (16%) | ||
AMN1 | <308..453 | CDD:187754 | 42/146 (29%) | ||
leucine-rich repeat | 308..327 | CDD:275381 | 5/18 (28%) | ||
leucine-rich repeat | 334..359 | CDD:275381 | 3/24 (13%) | ||
leucine-rich repeat | 360..385 | CDD:275381 | 8/24 (33%) | ||
leucine-rich repeat | 386..411 | CDD:275381 | 9/25 (36%) | ||
AMN1 | <409..586 | CDD:187754 | 28/116 (24%) | ||
leucine-rich repeat | 412..437 | CDD:275381 | 7/25 (28%) | ||
leucine-rich repeat | 438..463 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 464..515 | CDD:275381 | 11/50 (22%) | ||
leucine-rich repeat | 516..541 | CDD:275381 | 2/8 (25%) | ||
leucine-rich repeat | 542..561 | CDD:275381 | |||
leucine-rich repeat | 571..595 | CDD:275381 | |||
leucine-rich repeat | 596..621 | CDD:275381 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45457978 | |
Domainoid | 1 | 1.000 | 42 | 1.000 | Domainoid score | I3206 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |